This document compares the results of at least 2 CASAL model configurations (base and at least one sensitivity) and up to 6 Casal2 model configurations (3 BetaDiff and 3 ADOL-C).
The CASAL model sensitivity 1 has a smaller minimisation tolerance value than the CASAL base model (1e-9 vs. 1e-6).
The Casal2 ADOL-C and BetaDiff low tolerance models have a smaller tolerance value than the CASAL base model (1e-9 vs. 1e-6).
The main characteristics of the Test Case HOK (hoki) CASAL model are:
Observation data include:
Parameters estimated include:
## [1] "Thu Oct 7 12:19:24 2021"
## R version 3.6.3 (2020-02-29)
## Platform: x86_64-pc-linux-gnu (64-bit)
## Running under: Debian GNU/Linux 11 (bullseye)
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## Matrix products: default
## BLAS: /usr/lib/x86_64-linux-gnu/blas/libblas.so.3.9.0
## LAPACK: /usr/lib/x86_64-linux-gnu/lapack/liblapack.so.3.9.0
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## [7] LC_PAPER=en_NZ.UTF-8 LC_NAME=C
## [9] LC_ADDRESS=C LC_TELEPHONE=C
## [11] LC_MEASUREMENT=en_NZ.UTF-8 LC_IDENTIFICATION=C
##
## attached base packages:
## [1] stats graphics grDevices utils datasets methods base
##
## other attached packages:
## [1] Casal2_21.10 casal_2.30 devtools_2.4.2 usethis_2.0.1 rlist_0.4.6.2
## [6] ggthemes_4.2.4 gridExtra_2.3 coda_0.19-4 ggmcmc_1.5.1.1 ggplot2_3.3.5
## [11] tidyr_1.1.4 huxtable_5.4.0 dplyr_1.0.7 plyr_1.8.6
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## loaded via a namespace (and not attached):
## [1] Rcpp_1.0.7 lattice_0.20-41 prettyunits_1.1.1 ps_1.6.0
## [5] assertthat_0.2.1 rprojroot_2.0.2 digest_0.6.28 utf8_1.2.2
## [9] R6_2.5.1 evaluate_0.14 pillar_1.6.3 rlang_0.4.11
## [13] data.table_1.14.2 callr_3.7.0 jquerylib_0.1.4 rmarkdown_2.11
## [17] desc_1.4.0 stringr_1.4.0 munsell_0.5.0 compiler_3.6.3
## [21] xfun_0.26 pkgconfig_2.0.3 pkgbuild_1.2.0 htmltools_0.5.2
## [25] tidyselect_1.1.1 tibble_3.1.5 reshape_0.8.8 fansi_0.5.0
## [29] crayon_1.4.1 withr_2.4.2 grid_3.6.3 jsonlite_1.7.2
## [33] GGally_2.1.2 gtable_0.3.0 lifecycle_1.0.1 DBI_1.1.1
## [37] magrittr_2.0.1 scales_1.1.1 cli_3.0.1 stringi_1.7.5
## [41] cachem_1.0.6 fs_1.5.0 remotes_2.4.1 testthat_3.1.0
## [45] bslib_0.3.1 ellipsis_0.3.2 generics_0.1.0 vctrs_0.3.8
## [49] RColorBrewer_1.1-2 tools_3.6.3 glue_1.4.2 purrr_0.3.4
## [53] processx_3.5.2 pkgload_1.2.2 fastmap_1.1.0 yaml_2.2.1
## [57] colorspace_2.0-2 sessioninfo_1.1.1 memoise_2.0.0 knitr_1.36
## [61] sass_0.4.0
source('../../R-functions/report_read_in_CASAL_MPD_files.R')
source('../../R-functions/report_read_in_Casal2_MPD_files.R')
Tables of parameter estimates and objective function components for the CASAL and Casal2 model MPD results
| rownames | Base_Model | Sensitivity_1 | Percent_Diff |
|---|---|---|---|
| q[CSacous].q | 0.43120 | 0.43120 | 0.000 |
| q[WCacous].q | 0.30030 | 0.30020 | 0.033 |
| q[CRsum].q | 0.07431 | 0.07431 | 0.000 |
| q[SAsum].q | 0.05925 | 0.05925 | 0.000 |
| q[SAaut].q | 0.06717 | 0.06717 | 0.000 |
| relative_abundance[CRsumbio].cv_process_error | 0.14050 | 0.14050 | 0.000 |
| relative_abundance[SAsumbio].cv_process_error | 0.43060 | 0.43060 | 0.000 |
| log_B0_total | 14.34000 | 14.34000 | 0.000 |
| B0_prop_stock1 | 0.32870 | 0.32870 | 0.000 |
| natural_mortality.all | 0.29600 | 0.29600 | 0.000 |
| selectivity[Wspsl].shift_a | -0.21740 | -0.21740 | 0.000 |
| recruitment[E].YCS1 | 0.44780 | 0.44780 | 0.000 |
| recruitment[E].YCS2 | 0.72680 | 0.72680 | 0.000 |
| recruitment[E].YCS3 | 0.78450 | 0.78450 | 0.000 |
| recruitment[E].YCS4 | 1.36000 | 1.36000 | 0.000 |
| recruitment[E].YCS5 | 0.98770 | 0.98780 | -0.010 |
| recruitment[E].YCS6 | 0.32930 | 0.32930 | 0.000 |
| recruitment[E].YCS7 | 0.44720 | 0.44720 | 0.000 |
| recruitment[E].YCS8 | 0.26560 | 0.26560 | 0.000 |
| recruitment[E].YCS9 | 0.43420 | 0.43420 | 0.000 |
| recruitment[E].YCS10 | 0.48800 | 0.48800 | 0.000 |
| recruitment[E].YCS11 | 0.39570 | 0.39570 | 0.000 |
| recruitment[E].YCS12 | 0.21790 | 0.21790 | 0.000 |
| recruitment[E].YCS13 | 1.03600 | 1.03600 | 0.000 |
| recruitment[E].YCS14 | 0.95890 | 0.95890 | 0.000 |
| recruitment[E].YCS15 | 0.42900 | 0.42900 | 0.000 |
| recruitment[E].YCS16 | 0.13810 | 0.13810 | 0.000 |
| recruitment[E].YCS17 | 0.37500 | 0.37500 | 0.000 |
| recruitment[E].YCS18 | 0.39170 | 0.39160 | 0.026 |
| recruitment[E].YCS19 | 0.38310 | 0.38310 | 0.000 |
| recruitment[E].YCS20 | 0.56290 | 0.56290 | 0.000 |
| recruitment[E].YCS21 | 0.26400 | 0.26400 | 0.000 |
| recruitment[E].YCS22 | 0.28450 | 0.28450 | 0.000 |
| recruitment[E].YCS23 | 0.45000 | 0.45000 | 0.000 |
| recruitment[E].YCS24 | 0.25310 | 0.25310 | 0.000 |
| recruitment[E].YCS25 | 0.06000 | 0.06000 | 0.000 |
| recruitment[E].YCS26 | 0.46220 | 0.46220 | 0.000 |
| recruitment[E].YCS27 | 0.16160 | 0.16160 | 0.000 |
| recruitment[E].YCS28 | 0.26690 | 0.26690 | 0.000 |
| recruitment[E].YCS29 | 0.50040 | 0.50040 | 0.000 |
| recruitment[E].YCS30 | 0.52000 | 0.52000 | 0.000 |
| recruitment[E].YCS31 | 0.50880 | 0.50880 | 0.000 |
| recruitment[E].YCS32 | 0.60060 | 0.60060 | 0.000 |
| recruitment[E].YCS33 | 0.52210 | 0.52210 | 0.000 |
| recruitment[E].YCS34 | 0.37300 | 0.37300 | 0.000 |
| recruitment[E].YCS35 | 0.52680 | 0.52680 | 0.000 |
| recruitment[E].YCS36 | 0.15860 | 0.15860 | 0.000 |
| recruitment[E].YCS37 | 0.66060 | 0.66060 | 0.000 |
| recruitment[E].YCS38 | 0.15600 | 0.15600 | 0.000 |
| recruitment[E].YCS39 | 0.18580 | 0.18580 | 0.000 |
| recruitment[E].YCS40 | 0.73060 | 0.73060 | 0.000 |
| recruitment[E].YCS41 | 0.73910 | 0.73900 | 0.014 |
| recruitment[E].YCS42 | 1.19500 | 1.19500 | 0.000 |
| recruitment[W].YCS1 | 0.45700 | 0.45700 | 0.000 |
| recruitment[W].YCS2 | 0.82220 | 0.82220 | 0.000 |
| recruitment[W].YCS3 | 0.67000 | 0.67000 | 0.000 |
| recruitment[W].YCS4 | 0.65390 | 0.65390 | 0.000 |
| recruitment[W].YCS5 | 0.46590 | 0.46590 | 0.000 |
| recruitment[W].YCS6 | 0.51510 | 0.51510 | 0.000 |
| recruitment[W].YCS7 | 0.57820 | 0.57820 | 0.000 |
| recruitment[W].YCS8 | 0.47330 | 0.47330 | 0.000 |
| recruitment[W].YCS9 | 0.87190 | 0.87190 | 0.000 |
| recruitment[W].YCS10 | 0.83640 | 0.83650 | -0.012 |
| recruitment[W].YCS11 | 0.32020 | 0.32020 | 0.000 |
| recruitment[W].YCS12 | 0.16500 | 0.16500 | 0.000 |
| recruitment[W].YCS13 | 1.47600 | 1.47600 | 0.000 |
| recruitment[W].YCS14 | 0.77270 | 0.77280 | -0.013 |
| recruitment[W].YCS15 | 0.08135 | 0.08135 | 0.000 |
| recruitment[W].YCS16 | 0.08158 | 0.08158 | 0.000 |
| recruitment[W].YCS17 | 0.89280 | 0.89280 | 0.000 |
| recruitment[W].YCS18 | 1.26800 | 1.26800 | 0.000 |
| recruitment[W].YCS19 | 0.37720 | 0.37720 | 0.000 |
| recruitment[W].YCS20 | 0.95940 | 0.95940 | 0.000 |
| recruitment[W].YCS21 | 0.22110 | 0.22110 | 0.000 |
| recruitment[W].YCS22 | 0.19720 | 0.19720 | 0.000 |
| recruitment[W].YCS23 | 0.23790 | 0.23800 | -0.042 |
| recruitment[W].YCS24 | 0.20290 | 0.20290 | 0.000 |
| recruitment[W].YCS25 | 0.06000 | 0.06000 | 0.000 |
| recruitment[W].YCS26 | 0.37300 | 0.37300 | 0.000 |
| recruitment[W].YCS27 | 0.09548 | 0.09548 | 0.000 |
| recruitment[W].YCS28 | 0.79560 | 0.79560 | 0.000 |
| recruitment[W].YCS29 | 0.46520 | 0.46520 | 0.000 |
| recruitment[W].YCS30 | 0.51660 | 0.51660 | 0.000 |
| recruitment[W].YCS31 | 0.51130 | 0.51130 | 0.000 |
| recruitment[W].YCS32 | 0.75540 | 0.75540 | 0.000 |
| recruitment[W].YCS33 | 0.63890 | 0.63890 | 0.000 |
| recruitment[W].YCS34 | 0.61690 | 0.61690 | 0.000 |
| recruitment[W].YCS35 | 0.57840 | 0.57840 | 0.000 |
| recruitment[W].YCS36 | 0.14550 | 0.14550 | 0.000 |
| recruitment[W].YCS37 | 0.97480 | 0.97480 | 0.000 |
| recruitment[W].YCS38 | 0.16020 | 0.16020 | 0.000 |
| recruitment[W].YCS39 | 0.24440 | 0.24440 | 0.000 |
| recruitment[W].YCS40 | 2.19700 | 2.19700 | 0.000 |
| recruitment[W].YCS41 | 2.15200 | 2.15200 | 0.000 |
| recruitment[W].YCS42 | 1.19500 | 1.19500 | 0.000 |
| migration[Whome].rates_all1 | 0.32780 | 0.32780 | 0.000 |
| migration[Whome].rates_all2 | 0.30780 | 0.30780 | 0.000 |
| migration[Whome].rates_all3 | 0.47620 | 0.47620 | 0.000 |
| migration[Whome].rates_all4 | 0.14180 | 0.14180 | 0.000 |
| migration[Whome].rates_all5 | 0.46850 | 0.46840 | 0.021 |
| migration[Whome].rates_all6 | 0.74980 | 0.75030 | -0.067 |
| migration[Whome].rates_all7 | 0.79470 | 0.78840 | 0.793 |
| migration[Whome].rates_all8 | 1.00000 | 1.00000 | 0.000 |
| migration[Espmg].rates_all1 | 0.00566 | 0.00566 | 0.000 |
| migration[Espmg].rates_all2 | 0.16020 | 0.16020 | 0.000 |
| migration[Espmg].rates_all3 | 0.32410 | 0.32410 | 0.000 |
| migration[Espmg].rates_all4 | 0.43120 | 0.43120 | 0.000 |
| migration[Espmg].rates_all5 | 0.38550 | 0.38550 | 0.000 |
| migration[Espmg].rates_all6 | 0.46540 | 0.46530 | 0.021 |
| migration[Espmg].rates_all7 | 0.59900 | 0.59900 | 0.000 |
| migration[Espmg].rates_all8 | 0.60780 | 0.60780 | 0.000 |
| migration[Wspmg].rates_all1 | 0.10610 | 0.10610 | 0.000 |
| migration[Wspmg].rates_all2 | 0.28770 | 0.28770 | 0.000 |
| migration[Wspmg].rates_all3 | 0.27080 | 0.27080 | 0.000 |
| migration[Wspmg].rates_all4 | 0.45530 | 0.45530 | 0.000 |
| migration[Wspmg].rates_all5 | 0.48470 | 0.48470 | 0.000 |
| migration[Wspmg].rates_all6 | 0.52710 | 0.52710 | 0.000 |
| migration[Wspmg].rates_all7 | 0.66060 | 0.66060 | 0.000 |
| migration[Wspmg].rates_all8 | 0.59630 | 0.59630 | 0.000 |
| selectivity[Enspsl].all1 | 3.56700 | 3.56700 | 0.000 |
| selectivity[Enspsl].all2 | 1.22100 | 1.22100 | 0.000 |
| selectivity[Enspsl].all3 | 15.71000 | 15.71000 | 0.000 |
| selectivity[Wnspsl].all1 | 5.34100 | 5.34100 | 0.000 |
| selectivity[Wnspsl].all2 | 2.83900 | 2.83900 | 0.000 |
| selectivity[Wnspsl].all3 | 13.38000 | 13.38000 | 0.000 |
| selectivity[Espsl].all1 | 10.88000 | 10.88000 | 0.000 |
| selectivity[Espsl].all2 | 11.68000 | 11.68000 | 0.000 |
| selectivity[Espsl].all3 | 3.98200 | 3.98200 | 0.000 |
| selectivity[CRsl].all1 | 1.00000 | 1.00000 | 0.000 |
| selectivity[CRsl].all2 | 1.00000 | 1.00000 | 0.000 |
| selectivity[CRsl].all3 | 9.30000 | 9.30000 | 0.000 |
| selectivity[SAsl].all1 | 14.25000 | 14.25000 | 0.000 |
| selectivity[SAsl].all2 | 8.75500 | 8.75600 | -0.011 |
| selectivity[SAsl].all3 | 1.31500 | 1.31500 | 0.000 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| catchability[CSacous].q | 0.42724 | 0.42724 | 0.43116 | 0.43620 | 0.43759 | 0.43620 |
| catchability[WCacous].q | 0.31284 | 0.31284 | 0.30024 | 0.27935 | 0.27865 | 0.27935 |
| catchability[CRsum].q | 0.06832 | 0.06832 | 0.07431 | 0.07882 | 0.07810 | 0.07882 |
| catchability[SAsum].q | 0.06717 | 0.06717 | 0.05925 | 0.04682 | 0.04672 | 0.04682 |
| catchability[SAaut].q | 0.07578 | 0.07578 | 0.06717 | 0.05069 | 0.05056 | 0.05069 |
| observation[CRsumbio].process_error | 0.14094 | 0.14094 | 0.14048 | 0.14988 | 0.15002 | 0.14988 |
| observation[SAsumbio].process_error | 0.42364 | 0.42364 | 0.43061 | 0.40719 | 0.40768 | 0.40719 |
| process[recruit_E].b0 | 548395.00000 | 548396.00000 | 555125.00000 | 563986.00000 | 561577.00000 | 563986.00000 |
| process[recruit_W].b0 | 1082670.00000 | 1082670.00000 | 1133680.00000 | 1221080.00000 | 1221480.00000 | 1221080.00000 |
| process[Instant_mortality].m{west.sa} | 0.31271 | 0.31271 | 0.29598 | 0.27060 | 0.27154 | 0.27060 |
| time_varying[shifted_mu].a | -0.22921 | -0.22921 | -0.21744 | -0.17152 | -0.17186 | -0.17152 |
| process[recruit_E].ycs_values{1975} | 0.44537 | 0.44537 | 0.44782 | 0.44167 | 0.44318 | 0.44167 |
| process[recruit_E].ycs_values{1976} | 0.72939 | 0.72939 | 0.72680 | 0.70574 | 0.70766 | 0.70574 |
| process[recruit_E].ycs_values{1977} | 0.79231 | 0.79231 | 0.78454 | 0.75884 | 0.76047 | 0.75884 |
| process[recruit_E].ycs_values{1978} | 1.38644 | 1.38644 | 1.36001 | 1.30303 | 1.30519 | 1.30303 |
| process[recruit_E].ycs_values{1979} | 1.00265 | 1.00265 | 0.98776 | 0.95102 | 0.95419 | 0.95102 |
| process[recruit_E].ycs_values{1980} | 0.33437 | 0.33437 | 0.32932 | 0.31978 | 0.31930 | 0.31978 |
| process[recruit_E].ycs_values{1981} | 0.45502 | 0.45502 | 0.44723 | 0.43168 | 0.43209 | 0.43168 |
| process[recruit_E].ycs_values{1982} | 0.26974 | 0.26974 | 0.26556 | 0.25758 | 0.25761 | 0.25758 |
| process[recruit_E].ycs_values{1983} | 0.44106 | 0.44106 | 0.43418 | 0.42106 | 0.42158 | 0.42106 |
| process[recruit_E].ycs_values{1984} | 0.49412 | 0.49412 | 0.48804 | 0.47614 | 0.47603 | 0.47614 |
| process[recruit_E].ycs_values{1985} | 0.40010 | 0.40010 | 0.39570 | 0.38700 | 0.38691 | 0.38700 |
| process[recruit_E].ycs_values{1986} | 0.21978 | 0.21978 | 0.21791 | 0.21374 | 0.21422 | 0.21374 |
| process[recruit_E].ycs_values{1987} | 1.04131 | 1.04131 | 1.03640 | 1.01708 | 1.01531 | 1.01708 |
| process[recruit_E].ycs_values{1988} | 0.96346 | 0.96346 | 0.95891 | 0.93010 | 0.92926 | 0.93010 |
| process[recruit_E].ycs_values{1989} | 0.43095 | 0.43095 | 0.42899 | 0.42637 | 0.42657 | 0.42637 |
| process[recruit_E].ycs_values{1990} | 0.13797 | 0.13797 | 0.13810 | 0.13928 | 0.13924 | 0.13928 |
| process[recruit_E].ycs_values{1991} | 0.37385 | 0.37385 | 0.37500 | 0.37096 | 0.36961 | 0.37096 |
| process[recruit_E].ycs_values{1992} | 0.38858 | 0.38858 | 0.39164 | 0.38824 | 0.38668 | 0.38824 |
| process[recruit_E].ycs_values{1993} | 0.37995 | 0.37995 | 0.38310 | 0.38962 | 0.38912 | 0.38962 |
| process[recruit_E].ycs_values{1994} | 0.55794 | 0.55794 | 0.56285 | 0.55222 | 0.55037 | 0.55222 |
| process[recruit_E].ycs_values{1995} | 0.26178 | 0.26178 | 0.26399 | 0.26626 | 0.26598 | 0.26626 |
| process[recruit_E].ycs_values{1996} | 0.28251 | 0.28251 | 0.28447 | 0.28908 | 0.28876 | 0.28908 |
| process[recruit_E].ycs_values{1997} | 0.44781 | 0.44781 | 0.45003 | 0.45114 | 0.45042 | 0.45114 |
| process[recruit_E].ycs_values{1998} | 0.25264 | 0.25264 | 0.25307 | 0.25152 | 0.25106 | 0.25152 |
| process[recruit_E].ycs_values{1999} | 0.06000 | 0.06000 | 0.06000 | 0.06048 | 0.06044 | 0.06048 |
| process[recruit_E].ycs_values{2000} | 0.46013 | 0.46013 | 0.46220 | 0.46474 | 0.46387 | 0.46474 |
| process[recruit_E].ycs_values{2001} | 0.16086 | 0.16086 | 0.16165 | 0.16498 | 0.16478 | 0.16498 |
| process[recruit_E].ycs_values{2002} | 0.26611 | 0.26611 | 0.26689 | 0.26551 | 0.26408 | 0.26551 |
| process[recruit_E].ycs_values{2003} | 0.49959 | 0.49959 | 0.50038 | 0.50597 | 0.50549 | 0.50597 |
| process[recruit_E].ycs_values{2004} | 0.52053 | 0.52053 | 0.52003 | 0.52518 | 0.52434 | 0.52518 |
| process[recruit_E].ycs_values{2005} | 0.50764 | 0.50764 | 0.50882 | 0.51677 | 0.51627 | 0.51677 |
| process[recruit_E].ycs_values{2006} | 0.60013 | 0.60013 | 0.60055 | 0.60790 | 0.60732 | 0.60790 |
| process[recruit_E].ycs_values{2007} | 0.52088 | 0.52087 | 0.52215 | 0.53999 | 0.53977 | 0.53999 |
| process[recruit_E].ycs_values{2008} | 0.37115 | 0.37115 | 0.37300 | 0.37597 | 0.37447 | 0.37597 |
| process[recruit_E].ycs_values{2009} | 0.52790 | 0.52790 | 0.52681 | 0.54832 | 0.54813 | 0.54832 |
| process[recruit_E].ycs_values{2010} | 0.15695 | 0.15695 | 0.15864 | 0.16520 | 0.16516 | 0.16520 |
| process[recruit_E].ycs_values{2011} | 0.66047 | 0.66047 | 0.66058 | 0.68209 | 0.68152 | 0.68209 |
| process[recruit_E].ycs_values{2012} | 0.15554 | 0.15554 | 0.15600 | 0.16173 | 0.16198 | 0.16173 |
| process[recruit_E].ycs_values{2013} | 0.18518 | 0.18518 | 0.18584 | 0.19330 | 0.19292 | 0.19330 |
| process[recruit_E].ycs_values{2014} | 0.72844 | 0.72844 | 0.73062 | 0.77024 | 0.77017 | 0.77024 |
| process[recruit_E].ycs_values{2015} | 0.75586 | 0.75587 | 0.73900 | 0.68398 | 0.67924 | 0.68398 |
| process[recruit_E].ycs_values{2016} | 1.18886 | 1.18886 | 1.19515 | 1.31821 | 1.31921 | 1.31821 |
| process[recruit_W].ycs_values{1975} | 0.45869 | 0.45869 | 0.45702 | 0.47553 | 0.47402 | 0.47553 |
| process[recruit_W].ycs_values{1976} | 0.81422 | 0.81422 | 0.82218 | 0.84090 | 0.84341 | 0.84090 |
| process[recruit_W].ycs_values{1977} | 0.68515 | 0.68515 | 0.67000 | 0.66715 | 0.66688 | 0.66715 |
| process[recruit_W].ycs_values{1978} | 0.66937 | 0.66937 | 0.65390 | 0.65097 | 0.64955 | 0.65097 |
| process[recruit_W].ycs_values{1979} | 0.47307 | 0.47307 | 0.46590 | 0.46651 | 0.46803 | 0.46651 |
| process[recruit_W].ycs_values{1980} | 0.52064 | 0.52064 | 0.51512 | 0.52125 | 0.52010 | 0.52125 |
| process[recruit_W].ycs_values{1981} | 0.58344 | 0.58344 | 0.57824 | 0.58825 | 0.58791 | 0.58825 |
| process[recruit_W].ycs_values{1982} | 0.47462 | 0.47462 | 0.47328 | 0.48298 | 0.48290 | 0.48298 |
| process[recruit_W].ycs_values{1983} | 0.87309 | 0.87309 | 0.87192 | 0.89839 | 0.89765 | 0.89839 |
| process[recruit_W].ycs_values{1984} | 0.83633 | 0.83633 | 0.83646 | 0.86888 | 0.86846 | 0.86888 |
| process[recruit_W].ycs_values{1985} | 0.31942 | 0.31942 | 0.32024 | 0.33129 | 0.33218 | 0.33129 |
| process[recruit_W].ycs_values{1986} | 0.16493 | 0.16493 | 0.16497 | 0.16871 | 0.16903 | 0.16871 |
| process[recruit_W].ycs_values{1987} | 1.48007 | 1.48007 | 1.47555 | 1.55598 | 1.55512 | 1.55598 |
| process[recruit_W].ycs_values{1988} | 0.77454 | 0.77454 | 0.77276 | 0.80890 | 0.81064 | 0.80890 |
| process[recruit_W].ycs_values{1989} | 0.08148 | 0.08148 | 0.08134 | 0.08147 | 0.08139 | 0.08147 |
| process[recruit_W].ycs_values{1990} | 0.08183 | 0.08183 | 0.08158 | 0.08038 | 0.08152 | 0.08038 |
| process[recruit_W].ycs_values{1991} | 0.89197 | 0.89197 | 0.89280 | 0.85072 | 0.85283 | 0.85072 |
| process[recruit_W].ycs_values{1992} | 1.26757 | 1.26758 | 1.26778 | 1.25160 | 1.25074 | 1.25160 |
| process[recruit_W].ycs_values{1993} | 0.37652 | 0.37652 | 0.37722 | 0.37548 | 0.37518 | 0.37548 |
| process[recruit_W].ycs_values{1994} | 0.95579 | 0.95579 | 0.95939 | 0.99401 | 0.99334 | 0.99401 |
| process[recruit_W].ycs_values{1995} | 0.22026 | 0.22026 | 0.22113 | 0.22183 | 0.22155 | 0.22183 |
| process[recruit_W].ycs_values{1996} | 0.19632 | 0.19632 | 0.19718 | 0.18694 | 0.18693 | 0.18694 |
| process[recruit_W].ycs_values{1997} | 0.23643 | 0.23643 | 0.23795 | 0.23396 | 0.23508 | 0.23396 |
| process[recruit_W].ycs_values{1998} | 0.20041 | 0.20041 | 0.20292 | 0.21078 | 0.21116 | 0.21078 |
| process[recruit_W].ycs_values{1999} | 0.06000 | 0.06000 | 0.06000 | 0.06039 | 0.06036 | 0.06039 |
| process[recruit_W].ycs_values{2000} | 0.37089 | 0.37089 | 0.37304 | 0.37912 | 0.38023 | 0.37912 |
| process[recruit_W].ycs_values{2001} | 0.09506 | 0.09506 | 0.09548 | 0.09664 | 0.09671 | 0.09664 |
| process[recruit_W].ycs_values{2002} | 0.79553 | 0.79553 | 0.79558 | 0.79915 | 0.80116 | 0.79915 |
| process[recruit_W].ycs_values{2003} | 0.46570 | 0.46570 | 0.46517 | 0.47028 | 0.47077 | 0.47028 |
| process[recruit_W].ycs_values{2004} | 0.51761 | 0.51761 | 0.51662 | 0.52146 | 0.52238 | 0.52146 |
| process[recruit_W].ycs_values{2005} | 0.51305 | 0.51306 | 0.51126 | 0.51559 | 0.51622 | 0.51559 |
| process[recruit_W].ycs_values{2006} | 0.75475 | 0.75475 | 0.75544 | 0.74841 | 0.74906 | 0.74841 |
| process[recruit_W].ycs_values{2007} | 0.63692 | 0.63692 | 0.63891 | 0.61633 | 0.61695 | 0.61633 |
| process[recruit_W].ycs_values{2008} | 0.61564 | 0.61564 | 0.61686 | 0.60563 | 0.60627 | 0.60563 |
| process[recruit_W].ycs_values{2009} | 0.57305 | 0.57305 | 0.57841 | 0.55614 | 0.55728 | 0.55614 |
| process[recruit_W].ycs_values{2010} | 0.14618 | 0.14618 | 0.14547 | 0.14109 | 0.14136 | 0.14109 |
| process[recruit_W].ycs_values{2011} | 0.96708 | 0.96708 | 0.97478 | 0.94050 | 0.94018 | 0.94050 |
| process[recruit_W].ycs_values{2012} | 0.15909 | 0.15909 | 0.16016 | 0.15532 | 0.15512 | 0.15532 |
| process[recruit_W].ycs_values{2013} | 0.24402 | 0.24402 | 0.24444 | 0.22175 | 0.22188 | 0.22175 |
| process[recruit_W].ycs_values{2014} | 2.18651 | 2.18651 | 2.19657 | 2.08436 | 2.08138 | 2.08436 |
| process[recruit_W].ycs_values{2015} | 2.14758 | 2.14758 | 2.15204 | 2.13077 | 2.13206 | 2.13077 |
| process[recruit_W].ycs_values{2016} | 1.18909 | 1.18909 | 1.19539 | 1.31843 | 1.31946 | 1.31843 |
| selectivity[sel_Whome].v{1} | 0.32193 | 0.32193 | 0.32783 | 0.24972 | 0.24817 | 0.24972 |
| selectivity[sel_Whome].v{2} | 0.28491 | 0.28491 | 0.30778 | 0.17088 | 0.16809 | 0.17088 |
| selectivity[sel_Whome].v{3} | 0.45972 | 0.45972 | 0.47620 | 0.56407 | 0.55964 | 0.56407 |
| selectivity[sel_Whome].v{4} | 0.13549 | 0.13549 | 0.14184 | 0.31992 | 0.31122 | 0.31992 |
| selectivity[sel_Whome].v{5} | 0.43782 | 0.43782 | 0.46836 | 0.53561 | 0.54851 | 0.53561 |
| selectivity[sel_Whome].v{6} | 0.70821 | 0.70824 | 0.75026 | 0.98801 | 0.83550 | 0.98801 |
| selectivity[sel_Whome].v{7} | 0.99991 | 0.99989 | 0.78841 | 1.00000 | 1.00000 | 1.00000 |
| selectivity[sel_Espmg].v{1} | 0.00564 | 0.00564 | 0.00566 | 0.00463 | 0.00461 | 0.00463 |
| selectivity[sel_Espmg].v{2} | 0.15912 | 0.15912 | 0.16021 | 0.13897 | 0.13854 | 0.13897 |
| selectivity[sel_Espmg].v{3} | 0.32082 | 0.32082 | 0.32411 | 0.29478 | 0.29400 | 0.29478 |
| selectivity[sel_Espmg].v{4} | 0.42547 | 0.42547 | 0.43123 | 0.40903 | 0.40815 | 0.40903 |
| selectivity[sel_Espmg].v{5} | 0.37953 | 0.37953 | 0.38546 | 0.37865 | 0.37803 | 0.37865 |
| selectivity[sel_Espmg].v{6} | 0.45876 | 0.45876 | 0.46535 | 0.46838 | 0.46781 | 0.46838 |
| selectivity[sel_Espmg].v{7} | 0.59081 | 0.59081 | 0.59902 | 0.61234 | 0.61197 | 0.61234 |
| selectivity[sel_Espmg].v{8} | 0.61100 | 0.61100 | 0.60778 | 0.61083 | 0.61097 | 0.61083 |
| selectivity[sel_Wspmg].v{1} | 0.10556 | 0.10556 | 0.10614 | 0.12134 | 0.12116 | 0.12134 |
| selectivity[sel_Wspmg].v{2} | 0.29136 | 0.29136 | 0.28774 | 0.37466 | 0.37561 | 0.37466 |
| selectivity[sel_Wspmg].v{3} | 0.27068 | 0.27068 | 0.27076 | 0.27086 | 0.27076 | 0.27086 |
| selectivity[sel_Wspmg].v{4} | 0.45527 | 0.45527 | 0.45525 | 0.44370 | 0.44410 | 0.44370 |
| selectivity[sel_Wspmg].v{5} | 0.48421 | 0.48421 | 0.48466 | 0.48204 | 0.48091 | 0.48204 |
| selectivity[sel_Wspmg].v{6} | 0.52496 | 0.52496 | 0.52711 | 0.52945 | 0.53273 | 0.52945 |
| selectivity[sel_Wspmg].v{7} | 0.65298 | 0.65298 | 0.66062 | 0.67493 | 0.67367 | 0.67493 |
| selectivity[sel_Wspmg].v{8} | 0.60153 | 0.60153 | 0.59627 | 0.59640 | 0.59590 | 0.59640 |
| selectivity[Enspsl].mu | 3.57318 | 3.57318 | 3.56716 | 3.75591 | 3.75360 | 3.75591 |
| selectivity[Enspsl].sigma_l | 1.22245 | 1.22245 | 1.22108 | 1.33044 | 1.32957 | 1.33044 |
| selectivity[Enspsl].sigma_r | 49.99990 | 50.00000 | 15.71370 | 11.24720 | 11.42730 | 11.24720 |
| selectivity[Wnspsl].mu | 5.32840 | 5.32840 | 5.34117 | 14.50840 | 14.51590 | 14.50840 |
| selectivity[Wnspsl].sigma_l | 2.77815 | 2.77815 | 2.83934 | 49.00670 | 48.96160 | 49.00670 |
| selectivity[Wnspsl].sigma_r | 49.99980 | 49.99990 | 13.37890 | 1.00434 | 1.00400 | 1.00434 |
| selectivity[Espsl].mu | 11.25670 | 11.25670 | 10.87880 | 10.61680 | 10.62630 | 10.61680 |
| selectivity[Espsl].sigma_l | 10.86740 | 10.86730 | 11.67750 | 49.92470 | 49.93020 | 49.92470 |
| selectivity[Espsl].sigma_r | 4.02625 | 4.02625 | 3.98165 | 3.78315 | 3.78816 | 3.78315 |
| selectivity[CRsl].mu | 1.00000 | 1.00000 | 1.00000 | 1.00226 | 1.00209 | 1.00226 |
| selectivity[CRsl].sigma_l | 46.52190 | 46.52200 | 46.02310 | 49.98630 | 49.98740 | 49.98630 |
| selectivity[CRsl].sigma_r | 10.09280 | 10.09280 | 9.30042 | 8.55079 | 8.57200 | 8.55079 |
| selectivity[SAsl].mu | 14.86850 | 14.86850 | 14.25230 | 14.50030 | 14.51130 | 14.50030 |
| selectivity[SAsl].sigma_l | 8.69468 | 8.69467 | 8.75558 | 11.70950 | 11.71750 | 11.70950 |
| selectivity[SAsl].sigma_r | 1.00000 | 1.00000 | 1.31519 | 1.01524 | 1.01412 | 1.01524 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| catchability[CSacous].q | 0.000 | 0.000 | -0.918 | -2.096 | -2.422 | -2.096 |
| catchability[WCacous].q | 0.000 | 0.000 | 4.028 | 10.706 | 10.930 | 10.706 |
| catchability[CRsum].q | 0.000 | 0.000 | -8.765 | -15.367 | -14.322 | -15.367 |
| catchability[SAsum].q | 0.000 | -0.000 | 11.797 | 30.301 | 30.445 | 30.301 |
| catchability[SAaut].q | 0.000 | 0.000 | 11.363 | 33.105 | 33.282 | 33.105 |
| observation[CRsumbio].process_error | 0.000 | -0.001 | 0.328 | -6.342 | -6.439 | -6.342 |
| observation[SAsumbio].process_error | 0.000 | 0.000 | -1.645 | 3.884 | 3.767 | 3.884 |
| process[recruit_E].b0 | 0.000 | -0.000 | -1.227 | -2.843 | -2.404 | -2.843 |
| process[recruit_W].b0 | 0.000 | 0.000 | -4.712 | -12.784 | -12.821 | -12.784 |
| process[Instant_mortality].m{west.sa} | 0.000 | 0.000 | 5.349 | 13.468 | 13.166 | 13.468 |
| time_varying[shifted_mu].a | 0.000 | 0.000 | 5.135 | 25.172 | 25.020 | 25.172 |
| process[recruit_E].ycs_values{1975} | 0.000 | 0.000 | -0.549 | 0.831 | 0.493 | 0.831 |
| process[recruit_E].ycs_values{1976} | 0.000 | 0.000 | 0.355 | 3.242 | 2.978 | 3.242 |
| process[recruit_E].ycs_values{1977} | 0.000 | 0.000 | 0.981 | 4.224 | 4.019 | 4.224 |
| process[recruit_E].ycs_values{1978} | 0.000 | 0.000 | 1.906 | 6.016 | 5.860 | 6.016 |
| process[recruit_E].ycs_values{1979} | 0.000 | 0.000 | 1.485 | 5.150 | 4.833 | 5.150 |
| process[recruit_E].ycs_values{1980} | 0.000 | 0.000 | 1.512 | 4.365 | 4.506 | 4.365 |
| process[recruit_E].ycs_values{1981} | 0.000 | 0.000 | 1.712 | 5.128 | 5.040 | 5.128 |
| process[recruit_E].ycs_values{1982} | 0.000 | -0.000 | 1.550 | 4.510 | 4.497 | 4.510 |
| process[recruit_E].ycs_values{1983} | 0.000 | -0.001 | 1.559 | 4.535 | 4.417 | 4.535 |
| process[recruit_E].ycs_values{1984} | 0.000 | -0.000 | 1.229 | 3.638 | 3.661 | 3.638 |
| process[recruit_E].ycs_values{1985} | 0.000 | 0.000 | 1.101 | 3.273 | 3.297 | 3.273 |
| process[recruit_E].ycs_values{1986} | 0.000 | 0.000 | 0.850 | 2.744 | 2.530 | 2.744 |
| process[recruit_E].ycs_values{1987} | 0.000 | 0.000 | 0.472 | 2.327 | 2.497 | 2.327 |
| process[recruit_E].ycs_values{1988} | 0.000 | -0.000 | 0.471 | 3.462 | 3.549 | 3.462 |
| process[recruit_E].ycs_values{1989} | 0.000 | 0.000 | 0.455 | 1.064 | 1.018 | 1.064 |
| process[recruit_E].ycs_values{1990} | 0.000 | -0.001 | -0.101 | -0.951 | -0.920 | -0.951 |
| process[recruit_E].ycs_values{1991} | 0.000 | 0.000 | -0.307 | 0.775 | 1.134 | 0.775 |
| process[recruit_E].ycs_values{1992} | 0.000 | 0.000 | -0.787 | 0.086 | 0.488 | 0.086 |
| process[recruit_E].ycs_values{1993} | 0.000 | 0.000 | -0.831 | -2.547 | -2.413 | -2.547 |
| process[recruit_E].ycs_values{1994} | 0.000 | 0.000 | -0.880 | 1.026 | 1.357 | 1.026 |
| process[recruit_E].ycs_values{1995} | 0.000 | 0.000 | -0.843 | -1.713 | -1.606 | -1.713 |
| process[recruit_E].ycs_values{1996} | 0.000 | 0.000 | -0.695 | -2.328 | -2.213 | -2.328 |
| process[recruit_E].ycs_values{1997} | 0.000 | 0.000 | -0.496 | -0.743 | -0.582 | -0.743 |
| process[recruit_E].ycs_values{1998} | 0.000 | 0.000 | -0.170 | 0.443 | 0.625 | 0.443 |
| process[recruit_E].ycs_values{1999} | 0.000 | 0.000 | 0.000 | -0.795 | -0.733 | -0.795 |
| process[recruit_E].ycs_values{2000} | 0.000 | 0.000 | -0.449 | -1.002 | -0.812 | -1.002 |
| process[recruit_E].ycs_values{2001} | 0.000 | 0.001 | -0.489 | -2.561 | -2.433 | -2.561 |
| process[recruit_E].ycs_values{2002} | 0.000 | 0.000 | -0.294 | 0.224 | 0.761 | 0.224 |
| process[recruit_E].ycs_values{2003} | 0.000 | 0.000 | -0.159 | -1.278 | -1.181 | -1.278 |
| process[recruit_E].ycs_values{2004} | 0.000 | 0.000 | 0.096 | -0.893 | -0.733 | -0.893 |
| process[recruit_E].ycs_values{2005} | 0.000 | 0.000 | -0.233 | -1.799 | -1.700 | -1.799 |
| process[recruit_E].ycs_values{2006} | 0.000 | -0.000 | -0.070 | -1.295 | -1.198 | -1.295 |
| process[recruit_E].ycs_values{2007} | 0.000 | 0.000 | -0.244 | -3.669 | -3.627 | -3.669 |
| process[recruit_E].ycs_values{2008} | 0.000 | 0.000 | -0.500 | -1.300 | -0.895 | -1.300 |
| process[recruit_E].ycs_values{2009} | 0.000 | 0.000 | 0.206 | -3.869 | -3.832 | -3.869 |
| process[recruit_E].ycs_values{2010} | 0.000 | 0.000 | -1.074 | -5.258 | -5.228 | -5.258 |
| process[recruit_E].ycs_values{2011} | 0.000 | 0.000 | -0.017 | -3.272 | -3.186 | -3.272 |
| process[recruit_E].ycs_values{2012} | 0.000 | 0.000 | -0.294 | -3.981 | -4.139 | -3.981 |
| process[recruit_E].ycs_values{2013} | 0.000 | 0.000 | -0.355 | -4.388 | -4.180 | -4.388 |
| process[recruit_E].ycs_values{2014} | 0.000 | 0.000 | -0.299 | -5.737 | -5.728 | -5.737 |
| process[recruit_E].ycs_values{2015} | 0.000 | -0.000 | 2.231 | 9.511 | 10.137 | 9.511 |
| process[recruit_E].ycs_values{2016} | 0.000 | 0.000 | -0.529 | -10.880 | -10.964 | -10.880 |
| process[recruit_W].ycs_values{1975} | 0.000 | 0.001 | 0.365 | -3.670 | -3.342 | -3.670 |
| process[recruit_W].ycs_values{1976} | 0.000 | 0.000 | -0.977 | -3.277 | -3.585 | -3.277 |
| process[recruit_W].ycs_values{1977} | 0.000 | -0.001 | 2.210 | 2.626 | 2.667 | 2.626 |
| process[recruit_W].ycs_values{1978} | 0.000 | 0.001 | 2.311 | 2.749 | 2.962 | 2.749 |
| process[recruit_W].ycs_values{1979} | 0.000 | 0.000 | 1.517 | 1.386 | 1.067 | 1.386 |
| process[recruit_W].ycs_values{1980} | 0.000 | 0.000 | 1.061 | -0.116 | 0.104 | -0.116 |
| process[recruit_W].ycs_values{1981} | 0.000 | -0.000 | 0.892 | -0.825 | -0.766 | -0.825 |
| process[recruit_W].ycs_values{1982} | 0.000 | -0.000 | 0.284 | -1.762 | -1.744 | -1.762 |
| process[recruit_W].ycs_values{1983} | 0.000 | 0.000 | 0.133 | -2.898 | -2.814 | -2.898 |
| process[recruit_W].ycs_values{1984} | 0.000 | -0.000 | -0.016 | -3.892 | -3.842 | -3.892 |
| process[recruit_W].ycs_values{1985} | 0.000 | 0.000 | -0.257 | -3.715 | -3.996 | -3.715 |
| process[recruit_W].ycs_values{1986} | 0.000 | 0.000 | -0.021 | -2.291 | -2.483 | -2.291 |
| process[recruit_W].ycs_values{1987} | 0.000 | 0.000 | 0.305 | -5.129 | -5.071 | -5.129 |
| process[recruit_W].ycs_values{1988} | 0.000 | 0.000 | 0.229 | -4.436 | -4.661 | -4.436 |
| process[recruit_W].ycs_values{1989} | 0.000 | 0.000 | 0.160 | 0.009 | 0.102 | 0.009 |
| process[recruit_W].ycs_values{1990} | 0.000 | -0.000 | 0.304 | 1.769 | 0.377 | 1.769 |
| process[recruit_W].ycs_values{1991} | 0.000 | 0.000 | -0.093 | 4.625 | 4.388 | 4.625 |
| process[recruit_W].ycs_values{1992} | 0.000 | -0.001 | -0.017 | 1.260 | 1.328 | 1.260 |
| process[recruit_W].ycs_values{1993} | 0.000 | 0.001 | -0.185 | 0.277 | 0.356 | 0.277 |
| process[recruit_W].ycs_values{1994} | 0.000 | 0.000 | -0.377 | -3.999 | -3.928 | -3.999 |
| process[recruit_W].ycs_values{1995} | 0.000 | 0.000 | -0.392 | -0.712 | -0.583 | -0.712 |
| process[recruit_W].ycs_values{1996} | 0.000 | 0.000 | -0.440 | 4.775 | 4.780 | 4.775 |
| process[recruit_W].ycs_values{1997} | 0.000 | 0.000 | -0.644 | 1.043 | 0.572 | 1.043 |
| process[recruit_W].ycs_values{1998} | 0.000 | 0.000 | -1.251 | -5.177 | -5.366 | -5.177 |
| process[recruit_W].ycs_values{1999} | 0.000 | 0.000 | 0.000 | -0.653 | -0.602 | -0.653 |
| process[recruit_W].ycs_values{2000} | 0.000 | 0.000 | -0.580 | -2.220 | -2.518 | -2.220 |
| process[recruit_W].ycs_values{2001} | 0.000 | -0.000 | -0.446 | -1.666 | -1.736 | -1.666 |
| process[recruit_W].ycs_values{2002} | 0.000 | 0.000 | -0.007 | -0.455 | -0.708 | -0.455 |
| process[recruit_W].ycs_values{2003} | 0.000 | -0.000 | 0.114 | -0.983 | -1.088 | -0.983 |
| process[recruit_W].ycs_values{2004} | 0.000 | 0.000 | 0.191 | -0.744 | -0.922 | -0.744 |
| process[recruit_W].ycs_values{2005} | 0.000 | -0.000 | 0.350 | -0.494 | -0.617 | -0.494 |
| process[recruit_W].ycs_values{2006} | 0.000 | 0.000 | -0.091 | 0.840 | 0.754 | 0.840 |
| process[recruit_W].ycs_values{2007} | 0.000 | -0.000 | -0.312 | 3.232 | 3.135 | 3.232 |
| process[recruit_W].ycs_values{2008} | 0.000 | 0.000 | -0.198 | 1.626 | 1.522 | 1.626 |
| process[recruit_W].ycs_values{2009} | 0.000 | 0.000 | -0.934 | 2.952 | 2.752 | 2.952 |
| process[recruit_W].ycs_values{2010} | 0.000 | 0.000 | 0.483 | 3.479 | 3.293 | 3.479 |
| process[recruit_W].ycs_values{2011} | 0.000 | -0.000 | -0.796 | 2.749 | 2.782 | 2.749 |
| process[recruit_W].ycs_values{2012} | 0.000 | 0.000 | -0.674 | 2.368 | 2.495 | 2.368 |
| process[recruit_W].ycs_values{2013} | 0.000 | 0.000 | -0.172 | 9.126 | 9.072 | 9.126 |
| process[recruit_W].ycs_values{2014} | 0.000 | 0.000 | -0.460 | 4.672 | 4.808 | 4.672 |
| process[recruit_W].ycs_values{2015} | 0.000 | 0.000 | -0.208 | 0.783 | 0.723 | 0.783 |
| process[recruit_W].ycs_values{2016} | 0.000 | 0.000 | -0.530 | -10.877 | -10.964 | -10.877 |
| selectivity[sel_Whome].v{1} | 0.000 | 0.000 | -1.833 | 22.430 | 22.912 | 22.430 |
| selectivity[sel_Whome].v{2} | 0.000 | 0.000 | -8.027 | 40.025 | 41.002 | 40.025 |
| selectivity[sel_Whome].v{3} | 0.000 | 0.000 | -3.584 | -22.698 | -21.734 | -22.698 |
| selectivity[sel_Whome].v{4} | 0.000 | -0.002 | -4.687 | -136.120 | -129.699 | -136.120 |
| selectivity[sel_Whome].v{5} | 0.000 | 0.002 | -6.975 | -22.336 | -25.282 | -22.336 |
| selectivity[sel_Whome].v{6} | 0.000 | -0.003 | -5.937 | -39.507 | -17.973 | -39.507 |
| selectivity[sel_Whome].v{7} | 0.000 | 0.001 | 21.152 | -0.009 | -0.009 | -0.009 |
| selectivity[sel_Espmg].v{1} | 0.000 | -0.000 | -0.331 | 17.944 | 18.276 | 17.944 |
| selectivity[sel_Espmg].v{2} | 0.000 | -0.001 | -0.683 | 12.666 | 12.935 | 12.666 |
| selectivity[sel_Espmg].v{3} | 0.000 | -0.001 | -1.028 | 8.115 | 8.358 | 8.115 |
| selectivity[sel_Espmg].v{4} | 0.000 | -0.000 | -1.354 | 3.863 | 4.069 | 3.863 |
| selectivity[sel_Espmg].v{5} | 0.000 | -0.000 | -1.563 | 0.231 | 0.394 | 0.231 |
| selectivity[sel_Espmg].v{6} | 0.000 | -0.000 | -1.436 | -2.097 | -1.972 | -2.097 |
| selectivity[sel_Espmg].v{7} | 0.000 | -0.000 | -1.389 | -3.644 | -3.581 | -3.644 |
| selectivity[sel_Espmg].v{8} | 0.000 | 0.000 | 0.528 | 0.028 | 0.006 | 0.028 |
| selectivity[sel_Wspmg].v{1} | 0.000 | 0.000 | -0.552 | -14.946 | -14.779 | -14.946 |
| selectivity[sel_Wspmg].v{2} | 0.000 | -0.000 | 1.242 | -28.591 | -28.916 | -28.591 |
| selectivity[sel_Wspmg].v{3} | 0.000 | -0.000 | -0.029 | -0.066 | -0.027 | -0.066 |
| selectivity[sel_Wspmg].v{4} | 0.000 | 0.000 | 0.004 | 2.541 | 2.454 | 2.541 |
| selectivity[sel_Wspmg].v{5} | 0.000 | 0.000 | -0.092 | 0.448 | 0.682 | 0.448 |
| selectivity[sel_Wspmg].v{6} | 0.000 | 0.000 | -0.409 | -0.856 | -1.480 | -0.856 |
| selectivity[sel_Wspmg].v{7} | 0.000 | 0.000 | -1.171 | -3.362 | -3.169 | -3.362 |
| selectivity[sel_Wspmg].v{8} | 0.000 | 0.000 | 0.875 | 0.853 | 0.937 | 0.853 |
| selectivity[Enspsl].mu | 0.000 | 0.000 | 0.168 | -5.114 | -5.049 | -5.114 |
| selectivity[Enspsl].sigma_l | 0.000 | 0.000 | 0.112 | -8.834 | -8.763 | -8.834 |
| selectivity[Enspsl].sigma_r | 0.000 | -0.000 | 68.573 | 77.506 | 77.145 | 77.506 |
| selectivity[Wnspsl].mu | 0.000 | 0.000 | -0.240 | -172.284 | -172.425 | -172.284 |
| selectivity[Wnspsl].sigma_l | 0.000 | 0.000 | -2.203 | -1664.005 | -1662.381 | -1664.005 |
| selectivity[Wnspsl].sigma_r | 0.000 | -0.000 | 73.242 | 97.991 | 97.992 | 97.991 |
| selectivity[Espsl].mu | 0.000 | 0.000 | 3.357 | 5.685 | 5.600 | 5.685 |
| selectivity[Espsl].sigma_l | 0.000 | 0.001 | -7.454 | -359.399 | -359.449 | -359.399 |
| selectivity[Espsl].sigma_r | 0.000 | 0.000 | 1.108 | 6.038 | 5.913 | 6.038 |
| selectivity[CRsl].mu | 0.000 | 0.000 | 0.000 | -0.226 | -0.209 | -0.226 |
| selectivity[CRsl].sigma_l | 0.000 | -0.000 | 1.072 | -7.447 | -7.449 | -7.447 |
| selectivity[CRsl].sigma_r | 0.000 | 0.000 | 7.851 | 15.278 | 15.068 | 15.278 |
| selectivity[SAsl].mu | 0.000 | 0.000 | 4.144 | 2.476 | 2.402 | 2.476 |
| selectivity[SAsl].sigma_l | 0.000 | 0.000 | -0.700 | -34.674 | -34.766 | -34.674 |
| selectivity[SAsl].sigma_r | 0.000 | 0.000 | -31.519 | -1.524 | -1.412 | -1.524 |
| Component | Base_Model | Sensitivity_1 |
|---|---|---|
| CRsumbio | -31.030 | -31.030 |
| CSacous | -9.835 | -9.836 |
| SAautbio | -3.984 | -3.984 |
| SAsumbio | -6.146 | -6.146 |
| WCacous | -5.916 | -5.916 |
| CRsumage | 323.800 | 323.800 |
| SAautage | 35.120 | 35.120 |
| SAsumage | 221.100 | 221.100 |
| EnspOLF | 24.280 | 24.280 |
| Enspage | 256.100 | 256.100 |
| Espage | 581.500 | 581.500 |
| WnspOLF | 70.250 | 70.250 |
| Wnspage | 157.000 | 157.000 |
| Wspage | 364.800 | 364.800 |
| pspawn | -13.130 | -13.130 |
| pspawn_1993 | -6.015 | -6.015 |
| prior_on_q[CSacous].q | -0.839 | -0.839 |
| prior_on_q[WCacous].q | -1.202 | -1.202 |
| prior_on_q[CRsum].q | -2.207 | -2.207 |
| prior_on_q[SAsum].q | -1.557 | -1.557 |
| prior_on_q[SAaut].q | -1.762 | -1.762 |
| prior_on_relative_abundance[CRsumbio].cv_process_error | 0.000 | 0.000 |
| prior_on_relative_abundance[SAsumbio].cv_process_error | 0.000 | 0.000 |
| prior_on_log_B0_total | 0.000 | 0.000 |
| prior_on_B0_prop_stock1 | 12.560 | 12.560 |
| prior_on_natural_mortality.all | -1.217 | -1.217 |
| prior_on_selectivity[Wspsl].shift_a | 0.378 | 0.378 |
| prior_on_recruitment[E].YCS | -13.750 | -13.750 |
| prior_on_recruitment[W].YCS | -1.785 | -1.785 |
| prior_on_migration[Whome].rates_all | 0.000 | 0.000 |
| prior_on_migration[Espmg].rates_all | 0.000 | 0.000 |
| prior_on_migration[Wspmg].rates_all | 0.000 | 0.000 |
| prior_on_selectivity[Enspsl].all | 0.000 | 0.000 |
| prior_on_selectivity[Wnspsl].all | 0.000 | 0.000 |
| prior_on_selectivity[Espsl].all | 0.000 | 0.000 |
| prior_on_selectivity[CRsl].all | 0.000 | 0.000 |
| prior_on_selectivity[SAsl].all | 0.000 | 0.000 |
| Umax_Ensp1 | 0.000 | 0.000 |
| Umax_Ensp2 | 0.000 | 0.000 |
| Umax_Wnsp1 | 0.000 | 0.000 |
| Umax_Wnsp2 | 0.000 | 0.000 |
| Umax_Esp | 0.000 | 0.000 |
| Umax_Wsp | 0.000 | 0.000 |
| YCS.eq.16 | 0.000 | 0.000 |
| sp.migr | 0.013 | 0.013 |
| Total | 1947.000 | 1947.000 |
| rownames | betadiff_casal_flags_on | betadiff_casal_flags_off | betadiff_casal_flags_on_low_tol | adolc_casal_flags_on | adolc_casal_flags_off | adolc_casal_flags_on_low_tol |
|---|---|---|---|---|---|---|
| observation->CSacousbio-1991 | 2.342 | 2.342 | 2.404 | 2.367 | 2.367 | 2.367 |
| observation->CSacousbio-1993 | -0.577 | -0.577 | -0.588 | -0.590 | -0.590 | -0.590 |
| observation->CSacousbio-1994 | -0.016 | -0.016 | -0.030 | -0.045 | -0.044 | -0.045 |
| observation->CSacousbio-1995 | -0.562 | -0.562 | -0.567 | -0.572 | -0.572 | -0.572 |
| observation->CSacousbio-1996 | -0.027 | -0.026 | 0.013 | 0.064 | 0.062 | 0.064 |
| observation->CSacousbio-1997 | -0.912 | -0.912 | -0.899 | -0.883 | -0.885 | -0.883 |
| observation->CSacousbio-1998 | -0.054 | -0.054 | -0.004 | 0.044 | 0.039 | 0.044 |
| observation->CSacousbio-1999 | -1.025 | -1.025 | -1.012 | -0.996 | -0.998 | -0.996 |
| observation->CSacousbio-2001 | -1.217 | -1.217 | -1.211 | -1.205 | -1.206 | -1.205 |
| observation->CSacousbio-2002 | -0.297 | -0.297 | -0.338 | -0.399 | -0.397 | -0.399 |
| observation->CSacousbio-2003 | -0.845 | -0.845 | -0.863 | -0.893 | -0.891 | -0.893 |
| observation->CSacousbio-2005 | -0.929 | -0.929 | -0.927 | -0.916 | -0.918 | -0.916 |
| observation->CSacousbio-2006 | -0.939 | -0.939 | -0.950 | -0.968 | -0.970 | -0.968 |
| observation->CSacousbio-2007 | -0.623 | -0.623 | -0.600 | -0.547 | -0.546 | -0.547 |
| observation->CSacousbio-2008 | -1.094 | -1.094 | -1.125 | -1.176 | -1.176 | -1.176 |
| observation->CSacousbio-2009 | -0.185 | -0.185 | -0.110 | 0.053 | 0.051 | 0.053 |
| observation->CSacousbio-2011 | -1.021 | -1.021 | -1.000 | -0.964 | -0.965 | -0.964 |
| observation->CSacousbio-2013 | -0.892 | -0.892 | -0.855 | -0.842 | -0.844 | -0.842 |
| observation->CSacousbio-2015 | -0.190 | -0.190 | -0.150 | -0.195 | -0.199 | -0.195 |
| observation->CSacousbio-2017 | -1.020 | -1.020 | -1.021 | -0.987 | -0.986 | -0.987 |
| observation->WCacousbio-1988 | -0.588 | -0.588 | -0.588 | -0.589 | -0.589 | -0.589 |
| observation->WCacousbio-1989 | -0.183 | -0.183 | -0.168 | -0.068 | -0.076 | -0.068 |
| observation->WCacousbio-1990 | -0.332 | -0.332 | -0.327 | -0.260 | -0.267 | -0.260 |
| observation->WCacousbio-1991 | -0.425 | -0.425 | -0.425 | -0.425 | -0.425 | -0.425 |
| observation->WCacousbio-1992 | -0.744 | -0.744 | -0.744 | -0.728 | -0.728 | -0.728 |
| observation->WCacousbio-1993 | -0.369 | -0.369 | -0.374 | -0.488 | -0.488 | -0.488 |
| observation->WCacousbio-1997 | -0.054 | -0.054 | -0.043 | -0.011 | -0.011 | -0.011 |
| observation->WCacousbio-2000 | -1.265 | -1.265 | -1.272 | -1.278 | -1.278 | -1.278 |
| observation->WCacousbio-2012 | -0.906 | -0.906 | -0.896 | -0.800 | -0.802 | -0.800 |
| observation->WCacousbio-2013 | -1.079 | -1.079 | -1.079 | -1.068 | -1.068 | -1.068 |
| observation->CRsumbio-1992 | -1.634 | -1.634 | -1.647 | -1.533 | -1.531 | -1.533 |
| observation->CRsumbio-1993 | 0.040 | 0.040 | 0.043 | 0.394 | 0.392 | 0.394 |
| observation->CRsumbio-1994 | -1.760 | -1.760 | -1.760 | -1.723 | -1.722 | -1.723 |
| observation->CRsumbio-1995 | -1.425 | -1.425 | -1.406 | -1.345 | -1.341 | -1.345 |
| observation->CRsumbio-1996 | -1.690 | -1.690 | -1.699 | -1.706 | -1.705 | -1.706 |
| observation->CRsumbio-1997 | -0.607 | -0.607 | -0.635 | -0.827 | -0.820 | -0.827 |
| observation->CRsumbio-1998 | -1.203 | -1.203 | -1.210 | -1.054 | -1.060 | -1.054 |
| observation->CRsumbio-1999 | -0.953 | -0.953 | -0.919 | -0.816 | -0.820 | -0.816 |
| observation->CRsumbio-2000 | -1.629 | -1.629 | -1.632 | -1.636 | -1.633 | -1.636 |
| observation->CRsumbio-2001 | -1.773 | -1.773 | -1.775 | -1.729 | -1.728 | -1.729 |
| observation->CRsumbio-2002 | -1.209 | -1.209 | -1.206 | -1.089 | -1.097 | -1.089 |
| observation->CRsumbio-2003 | -1.749 | -1.749 | -1.744 | -1.722 | -1.724 | -1.722 |
| observation->CRsumbio-2004 | -0.818 | -0.818 | -0.803 | -0.849 | -0.854 | -0.849 |
| observation->CRsumbio-2005 | -1.471 | -1.471 | -1.477 | -1.459 | -1.457 | -1.459 |
| observation->CRsumbio-2006 | -1.314 | -1.314 | -1.306 | -1.450 | -1.451 | -1.450 |
| observation->CRsumbio-2007 | -0.727 | -0.727 | -0.756 | -0.640 | -0.645 | -0.640 |
| observation->CRsumbio-2008 | -0.373 | -0.373 | -0.402 | -0.445 | -0.439 | -0.445 |
| observation->CRsumbio-2009 | -0.586 | -0.586 | -0.559 | -0.619 | -0.615 | -0.619 |
| observation->CRsumbio-2010 | -1.349 | -1.349 | -1.359 | -1.318 | -1.314 | -1.318 |
| observation->CRsumbio-2011 | -1.096 | -1.096 | -1.105 | -1.095 | -1.094 | -1.095 |
| observation->CRsumbio-2012 | -1.439 | -1.439 | -1.448 | -1.371 | -1.367 | -1.371 |
| observation->CRsumbio-2013 | -1.494 | -1.494 | -1.491 | -1.433 | -1.433 | -1.433 |
| observation->CRsumbio-2014 | -1.768 | -1.768 | -1.770 | -1.724 | -1.723 | -1.724 |
| observation->CRsumbio-2016 | -1.410 | -1.410 | -1.411 | -1.281 | -1.281 | -1.281 |
| observation->CRsumbio-2018 | -1.552 | -1.552 | -1.554 | -1.485 | -1.485 | -1.485 |
| observation->SAsumbio-1992 | -0.597 | -0.597 | -0.588 | -0.696 | -0.692 | -0.696 |
| observation->SAsumbio-1993 | -0.314 | -0.314 | -0.309 | -0.479 | -0.477 | -0.479 |
| observation->SAsumbio-1994 | 0.196 | 0.196 | 0.186 | 0.032 | 0.027 | 0.032 |
| observation->SAsumbio-2001 | -0.835 | -0.835 | -0.822 | -0.866 | -0.866 | -0.866 |
| observation->SAsumbio-2002 | -0.794 | -0.794 | -0.777 | -0.822 | -0.822 | -0.822 |
| observation->SAsumbio-2003 | -0.837 | -0.837 | -0.825 | -0.868 | -0.867 | -0.868 |
| observation->SAsumbio-2004 | 0.732 | 0.732 | 0.734 | 0.748 | 0.750 | 0.748 |
| observation->SAsumbio-2005 | -0.258 | -0.258 | -0.218 | -0.229 | -0.226 | -0.229 |
| observation->SAsumbio-2006 | -0.600 | -0.600 | -0.558 | -0.616 | -0.615 | -0.616 |
| observation->SAsumbio-2007 | 0.636 | 0.636 | 0.654 | 0.806 | 0.812 | 0.806 |
| observation->SAsumbio-2008 | -0.461 | -0.461 | -0.462 | -0.520 | -0.520 | -0.520 |
| observation->SAsumbio-2009 | -0.585 | -0.585 | -0.583 | -0.636 | -0.639 | -0.636 |
| observation->SAsumbio-2010 | -0.143 | -0.143 | -0.147 | -0.156 | -0.155 | -0.156 |
| observation->SAsumbio-2012 | -0.848 | -0.848 | -0.835 | -0.880 | -0.879 | -0.880 |
| observation->SAsumbio-2013 | -0.797 | -0.797 | -0.786 | -0.821 | -0.820 | -0.821 |
| observation->SAsumbio-2015 | -0.200 | -0.200 | -0.189 | -0.279 | -0.279 | -0.279 |
| observation->SAsumbio-2017 | -0.638 | -0.638 | -0.620 | -0.701 | -0.701 | -0.701 |
| observation->SAautbio-1992 | -1.459 | -1.459 | -1.450 | -1.353 | -1.355 | -1.353 |
| observation->SAautbio-1996 | -1.233 | -1.232 | -1.250 | -1.256 | -1.259 | -1.256 |
| observation->SAautbio-1998 | -1.308 | -1.308 | -1.284 | -1.283 | -1.285 | -1.283 |
| observation->Espage-1988 | 19.793 | 19.793 | 19.640 | 19.503 | 19.505 | 19.503 |
| observation->Espage-1989 | 15.858 | 15.858 | 15.862 | 15.868 | 15.864 | 15.868 |
| observation->Espage-1990 | 21.488 | 21.488 | 21.446 | 21.394 | 21.385 | 21.394 |
| observation->Espage-1991 | 20.641 | 20.641 | 20.612 | 20.528 | 20.523 | 20.528 |
| observation->Espage-1992 | 24.089 | 24.089 | 24.020 | 23.900 | 23.916 | 23.900 |
| observation->Espage-1993 | 19.305 | 19.305 | 19.328 | 19.451 | 19.450 | 19.451 |
| observation->Espage-1994 | 20.528 | 20.528 | 20.503 | 20.461 | 20.452 | 20.461 |
| observation->Espage-1995 | 22.541 | 22.541 | 22.559 | 22.538 | 22.526 | 22.538 |
| observation->Espage-1996 | 18.590 | 18.590 | 18.577 | 18.573 | 18.574 | 18.573 |
| observation->Espage-1997 | 20.974 | 20.974 | 20.964 | 20.869 | 20.875 | 20.869 |
| observation->Espage-1998 | 20.587 | 20.587 | 20.611 | 20.546 | 20.533 | 20.546 |
| observation->Espage-1999 | 22.886 | 22.886 | 22.862 | 22.689 | 22.672 | 22.689 |
| observation->Espage-2000 | 23.321 | 23.321 | 23.314 | 23.422 | 23.422 | 23.422 |
| observation->Espage-2001 | 20.735 | 20.735 | 20.773 | 20.804 | 20.799 | 20.804 |
| observation->Espage-2002 | 26.248 | 26.248 | 26.287 | 26.199 | 26.186 | 26.199 |
| observation->Espage-2003 | 19.120 | 19.120 | 19.120 | 19.082 | 19.078 | 19.082 |
| observation->Espage-2004 | 22.692 | 22.692 | 22.642 | 22.575 | 22.584 | 22.575 |
| observation->Espage-2005 | 26.122 | 26.122 | 26.070 | 25.966 | 25.957 | 25.966 |
| observation->Espage-2006 | 23.242 | 23.242 | 23.149 | 23.088 | 23.096 | 23.088 |
| observation->Espage-2007 | 25.274 | 25.274 | 25.210 | 25.150 | 25.161 | 25.150 |
| observation->Espage-2008 | 22.167 | 22.168 | 22.129 | 22.091 | 22.088 | 22.091 |
| observation->Espage-2009 | 18.691 | 18.691 | 18.690 | 18.676 | 18.673 | 18.676 |
| observation->Espage-2010 | 21.855 | 21.855 | 21.851 | 21.785 | 21.785 | 21.785 |
| observation->Espage-2014 | 20.616 | 20.616 | 20.648 | 20.610 | 20.607 | 20.610 |
| observation->Espage-2015 | 21.823 | 21.823 | 21.870 | 21.916 | 21.907 | 21.916 |
| observation->Espage-2016 | 21.204 | 21.204 | 21.204 | 21.209 | 21.208 | 21.209 |
| observation->Espage-2017 | 21.575 | 21.575 | 21.563 | 21.585 | 21.585 | 21.585 |
| observation->Wspage-1988 | 15.724 | 15.724 | 15.753 | 16.227 | 16.229 | 16.227 |
| observation->Wspage-1989 | 11.555 | 11.555 | 11.566 | 11.716 | 11.717 | 11.716 |
| observation->Wspage-1990 | 11.752 | 11.751 | 11.790 | 12.115 | 12.123 | 12.115 |
| observation->Wspage-1991 | 13.036 | 13.036 | 13.051 | 13.254 | 13.257 | 13.254 |
| observation->Wspage-1992 | 10.178 | 10.178 | 10.170 | 10.161 | 10.164 | 10.161 |
| observation->Wspage-1993 | 10.569 | 10.569 | 10.579 | 10.497 | 10.500 | 10.497 |
| observation->Wspage-1994 | 9.918 | 9.918 | 9.924 | 9.840 | 9.845 | 9.840 |
| observation->Wspage-1995 | 13.403 | 13.403 | 13.396 | 13.424 | 13.424 | 13.424 |
| observation->Wspage-1996 | 11.840 | 11.840 | 11.844 | 11.929 | 11.933 | 11.929 |
| observation->Wspage-1997 | 11.230 | 11.230 | 11.243 | 11.370 | 11.377 | 11.370 |
| observation->Wspage-1998 | 11.761 | 11.761 | 11.762 | 11.787 | 11.788 | 11.787 |
| observation->Wspage-1999 | 11.975 | 11.975 | 11.981 | 12.141 | 12.139 | 12.141 |
| observation->Wspage-2000 | 11.256 | 11.256 | 11.260 | 11.374 | 11.379 | 11.374 |
| observation->Wspage-2001 | 12.179 | 12.179 | 12.201 | 12.275 | 12.281 | 12.275 |
| observation->Wspage-2002 | 9.731 | 9.731 | 9.745 | 9.798 | 9.800 | 9.798 |
| observation->Wspage-2003 | 9.555 | 9.555 | 9.556 | 9.585 | 9.588 | 9.585 |
| observation->Wspage-2004 | 14.340 | 14.340 | 14.304 | 14.283 | 14.284 | 14.283 |
| observation->Wspage-2005 | 14.932 | 14.932 | 14.977 | 15.129 | 15.126 | 15.129 |
| observation->Wspage-2006 | 13.817 | 13.817 | 13.872 | 14.093 | 14.102 | 14.093 |
| observation->Wspage-2007 | 11.498 | 11.498 | 11.516 | 11.527 | 11.530 | 11.527 |
| observation->Wspage-2008 | 12.195 | 12.195 | 12.194 | 11.980 | 11.989 | 11.980 |
| observation->Wspage-2009 | 12.631 | 12.631 | 12.594 | 12.212 | 12.211 | 12.212 |
| observation->Wspage-2010 | 11.316 | 11.316 | 11.299 | 11.207 | 11.210 | 11.207 |
| observation->Wspage-2011 | 11.154 | 11.154 | 11.137 | 11.088 | 11.091 | 11.088 |
| observation->Wspage-2012 | 11.867 | 11.867 | 11.860 | 11.846 | 11.846 | 11.846 |
| observation->Wspage-2013 | 11.041 | 11.041 | 11.065 | 11.071 | 11.071 | 11.071 |
| observation->Wspage-2014 | 12.944 | 12.944 | 12.941 | 12.934 | 12.936 | 12.934 |
| observation->Wspage-2015 | 13.134 | 13.134 | 13.101 | 13.009 | 13.012 | 13.009 |
| observation->Wspage-2016 | 14.272 | 14.272 | 14.273 | 14.339 | 14.332 | 14.339 |
| observation->Wspage-2017 | 13.745 | 13.745 | 13.797 | 14.070 | 14.065 | 14.070 |
| observation->EnspOLF-1992 | 4.397 | 4.397 | 4.388 | 4.296 | 4.296 | 4.296 |
| observation->EnspOLF-1994 | 6.647 | 6.647 | 6.678 | 6.658 | 6.645 | 6.658 |
| observation->EnspOLF-1996 | 7.897 | 7.897 | 7.906 | 7.748 | 7.746 | 7.748 |
| observation->EnspOLF-1998 | 5.301 | 5.301 | 5.303 | 5.207 | 5.205 | 5.207 |
| observation->Enspage-1999 | 14.332 | 14.332 | 14.287 | 14.449 | 14.454 | 14.449 |
| observation->Enspage-2000 | 13.975 | 13.975 | 13.960 | 14.046 | 14.049 | 14.046 |
| observation->Enspage-2001 | 13.979 | 13.979 | 13.929 | 13.846 | 13.866 | 13.846 |
| observation->Enspage-2002 | 12.081 | 12.081 | 12.078 | 11.985 | 12.001 | 11.985 |
| observation->Enspage-2003 | 9.700 | 9.700 | 9.706 | 9.720 | 9.722 | 9.720 |
| observation->Enspage-2004 | 12.966 | 12.966 | 12.986 | 12.792 | 12.791 | 12.792 |
| observation->Enspage-2005 | 11.012 | 11.012 | 11.009 | 10.976 | 10.963 | 10.976 |
| observation->Enspage-2006 | 12.741 | 12.741 | 12.712 | 12.868 | 12.890 | 12.868 |
| observation->Enspage-2007 | 11.061 | 11.061 | 11.052 | 11.120 | 11.108 | 11.120 |
| observation->Enspage-2008 | 12.104 | 12.104 | 12.101 | 12.193 | 12.190 | 12.193 |
| observation->Enspage-2009 | 10.056 | 10.056 | 10.055 | 10.052 | 10.051 | 10.052 |
| observation->Enspage-2010 | 17.581 | 17.581 | 17.627 | 17.587 | 17.539 | 17.587 |
| observation->Enspage-2011 | 13.399 | 13.399 | 13.412 | 13.315 | 13.313 | 13.315 |
| observation->Enspage-2012 | 13.149 | 13.149 | 13.134 | 13.008 | 13.013 | 13.008 |
| observation->Enspage-2013 | 16.694 | 16.694 | 16.659 | 16.738 | 16.736 | 16.738 |
| observation->Enspage-2014 | 13.869 | 13.869 | 13.870 | 13.910 | 13.914 | 13.910 |
| observation->Enspage-2015 | 12.760 | 12.760 | 12.776 | 12.786 | 12.792 | 12.786 |
| observation->Enspage-2016 | 19.224 | 19.224 | 19.203 | 19.292 | 19.302 | 19.292 |
| observation->Enspage-2017 | 15.562 | 15.562 | 15.511 | 15.614 | 15.600 | 15.614 |
| observation->WnspOLF-1992 | 10.122 | 10.122 | 10.129 | 11.331 | 11.338 | 11.331 |
| observation->WnspOLF-1993 | 9.045 | 9.045 | 8.991 | 9.950 | 9.963 | 9.950 |
| observation->WnspOLF-1994 | 15.930 | 15.930 | 15.893 | 19.124 | 19.092 | 19.124 |
| observation->WnspOLF-1996 | 9.788 | 9.788 | 9.752 | 8.934 | 8.934 | 8.934 |
| observation->WnspOLF-1999 | 11.553 | 11.553 | 11.593 | 10.854 | 10.863 | 10.854 |
| observation->WnspOLF-2000 | 13.812 | 13.812 | 13.892 | 14.053 | 14.075 | 14.053 |
| observation->Wnspage-2001 | 8.032 | 8.032 | 7.994 | 8.341 | 8.344 | 8.341 |
| observation->Wnspage-2002 | 8.715 | 8.715 | 8.701 | 8.602 | 8.600 | 8.602 |
| observation->Wnspage-2003 | 10.473 | 10.473 | 10.507 | 10.608 | 10.610 | 10.608 |
| observation->Wnspage-2004 | 7.155 | 7.155 | 7.140 | 7.063 | 7.064 | 7.063 |
| observation->Wnspage-2006 | 9.589 | 9.589 | 9.551 | 9.999 | 9.994 | 9.999 |
| observation->Wnspage-2007 | 10.861 | 10.861 | 10.822 | 11.404 | 11.399 | 11.404 |
| observation->Wnspage-2008 | 12.425 | 12.425 | 12.435 | 12.941 | 12.943 | 12.941 |
| observation->Wnspage-2009 | 14.716 | 14.716 | 14.790 | 14.160 | 14.160 | 14.160 |
| observation->Wnspage-2010 | 11.405 | 11.405 | 11.370 | 11.466 | 11.466 | 11.466 |
| observation->Wnspage-2011 | 11.267 | 11.267 | 11.275 | 11.092 | 11.096 | 11.092 |
| observation->Wnspage-2012 | 10.454 | 10.454 | 10.465 | 10.775 | 10.779 | 10.775 |
| observation->Wnspage-2013 | 13.633 | 13.633 | 13.634 | 13.685 | 13.687 | 13.685 |
| observation->Wnspage-2014 | 12.608 | 12.608 | 12.597 | 11.238 | 11.241 | 11.238 |
| observation->Wnspage-2016 | 15.687 | 15.687 | 15.722 | 14.898 | 14.887 | 14.898 |
| observation->CRsumage-1992 | 15.584 | 15.584 | 15.566 | 14.750 | 14.736 | 14.750 |
| observation->CRsumage-1993 | 10.616 | 10.616 | 10.624 | 10.556 | 10.554 | 10.556 |
| observation->CRsumage-1994 | 18.170 | 18.170 | 18.130 | 17.555 | 17.556 | 17.555 |
| observation->CRsumage-1995 | 14.285 | 14.285 | 14.242 | 13.675 | 13.648 | 13.675 |
| observation->CRsumage-1996 | 11.567 | 11.567 | 11.607 | 11.097 | 11.090 | 11.097 |
| observation->CRsumage-1997 | 15.754 | 15.754 | 15.688 | 15.420 | 15.411 | 15.420 |
| observation->CRsumage-1998 | 14.690 | 14.690 | 14.690 | 13.355 | 13.348 | 13.355 |
| observation->CRsumage-1999 | 12.061 | 12.061 | 12.084 | 12.396 | 12.384 | 12.396 |
| observation->CRsumage-2000 | 14.323 | 14.323 | 14.283 | 14.708 | 14.729 | 14.708 |
| observation->CRsumage-2001 | 19.659 | 19.659 | 19.520 | 18.906 | 18.915 | 18.906 |
| observation->CRsumage-2002 | 10.969 | 10.969 | 10.960 | 11.011 | 11.022 | 11.011 |
| observation->CRsumage-2003 | 11.251 | 11.251 | 11.210 | 11.162 | 11.164 | 11.162 |
| observation->CRsumage-2004 | 9.553 | 9.553 | 9.561 | 9.094 | 9.097 | 9.094 |
| observation->CRsumage-2005 | 12.753 | 12.753 | 12.654 | 12.421 | 12.406 | 12.421 |
| observation->CRsumage-2006 | 10.316 | 10.316 | 10.317 | 11.101 | 11.113 | 11.101 |
| observation->CRsumage-2007 | 13.562 | 13.562 | 13.504 | 13.090 | 13.096 | 13.090 |
| observation->CRsumage-2008 | 11.661 | 11.661 | 11.639 | 11.751 | 11.751 | 11.751 |
| observation->CRsumage-2009 | 12.006 | 12.006 | 11.965 | 12.008 | 12.017 | 12.008 |
| observation->CRsumage-2010 | 11.048 | 11.048 | 11.055 | 11.708 | 11.690 | 11.708 |
| observation->CRsumage-2011 | 12.579 | 12.579 | 12.571 | 13.701 | 13.711 | 13.701 |
| observation->CRsumage-2012 | 17.228 | 17.228 | 17.141 | 16.248 | 16.259 | 16.248 |
| observation->CRsumage-2013 | 11.843 | 11.843 | 11.822 | 12.775 | 12.784 | 12.775 |
| observation->CRsumage-2014 | 11.286 | 11.286 | 11.271 | 11.426 | 11.424 | 11.426 |
| observation->CRsumage-2016 | 9.866 | 9.866 | 9.847 | 10.399 | 10.405 | 10.399 |
| observation->CRsumage-2018 | 11.931 | 11.931 | 11.895 | 12.579 | 12.582 | 12.579 |
| observation->SAsumage-1992 | 12.246 | 12.246 | 12.269 | 12.116 | 12.130 | 12.116 |
| observation->SAsumage-1993 | 12.470 | 12.470 | 12.502 | 12.756 | 12.758 | 12.756 |
| observation->SAsumage-1994 | 10.811 | 10.811 | 10.818 | 10.929 | 10.929 | 10.929 |
| observation->SAsumage-2001 | 12.749 | 12.749 | 12.839 | 12.998 | 13.002 | 12.998 |
| observation->SAsumage-2002 | 12.209 | 12.209 | 12.254 | 12.443 | 12.443 | 12.443 |
| observation->SAsumage-2003 | 13.386 | 13.386 | 13.386 | 13.620 | 13.615 | 13.620 |
| observation->SAsumage-2004 | 11.067 | 11.067 | 11.005 | 11.095 | 11.104 | 11.095 |
| observation->SAsumage-2005 | 15.278 | 15.278 | 15.386 | 15.779 | 15.765 | 15.779 |
| observation->SAsumage-2006 | 14.112 | 14.112 | 14.078 | 14.243 | 14.236 | 14.243 |
| observation->SAsumage-2007 | 10.649 | 10.649 | 10.639 | 10.765 | 10.768 | 10.765 |
| observation->SAsumage-2008 | 13.771 | 13.771 | 13.836 | 13.930 | 13.933 | 13.930 |
| observation->SAsumage-2009 | 15.513 | 15.513 | 15.530 | 15.750 | 15.740 | 15.750 |
| observation->SAsumage-2010 | 15.081 | 15.081 | 15.130 | 15.587 | 15.573 | 15.587 |
| observation->SAsumage-2012 | 13.437 | 13.437 | 13.479 | 13.414 | 13.412 | 13.414 |
| observation->SAsumage-2013 | 11.954 | 11.954 | 11.982 | 12.021 | 12.025 | 12.021 |
| observation->SAsumage-2015 | 13.522 | 13.522 | 13.540 | 14.057 | 14.067 | 14.057 |
| observation->SAsumage-2017 | 12.492 | 12.492 | 12.478 | 12.571 | 12.569 | 12.571 |
| observation->SAautage-1992 | 11.809 | 11.809 | 11.857 | 12.224 | 12.222 | 12.224 |
| observation->SAautage-1996 | 10.449 | 10.449 | 10.426 | 10.558 | 10.569 | 10.558 |
| observation->SAautage-1998 | 12.809 | 12.809 | 12.835 | 12.904 | 12.901 | 12.904 |
| observation->pspawn_1993 | -6.017 | -6.017 | -6.015 | -5.880 | -5.878 | -5.880 |
| observation->pspawn-1992 | -4.848 | -4.848 | -4.829 | -4.799 | -4.802 | -4.799 |
| observation->pspawn-1998 | -8.284 | -8.284 | -8.300 | -8.240 | -8.225 | -8.240 |
| prior->CSacousq->catchability[CSacous].q | -0.849 | -0.849 | -0.839 | -0.826 | -0.823 | -0.826 |
| prior->WCacousq->catchability[WCacous].q | -1.162 | -1.162 | -1.202 | -1.264 | -1.266 | -1.264 |
| prior->CRsumq->catchability[CRsum].q | -2.155 | -2.155 | -2.207 | -2.231 | -2.228 | -2.231 |
| prior->SAsumq->catchability[SAsum].q | -1.762 | -1.762 | -1.557 | -1.038 | -1.033 | -1.038 |
| prior->SAautq->catchability[SAaut].q | -1.913 | -1.913 | -1.762 | -1.233 | -1.227 | -1.233 |
| prior->CR_process_error->observation[CRsumbio].process_error | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SA_process_error->observation[SAsumbio].process_error | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->B0_E_with_total_log_b0_prior->process[recruit_E].b0 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->B0_W_with_proportion_prior->process[recruit_W].b0 | 12.544 | 12.544 | 12.555 | 12.594 | 12.598 | 12.594 |
| prior->M_all->process[Instant_mortality].m{west.sa} | -1.085 | -1.085 | -1.217 | -1.151 | -1.160 | -1.151 |
| prior->Wspsl_shift_param->time_varying[shifted_mu].a | 0.420 | 0.420 | 0.378 | 0.235 | 0.236 | 0.235 |
| prior->YCS_E->process[recruit_E].ycs_values{1975} | -0.624 | -0.624 | -0.623 | -0.626 | -0.625 | -0.626 |
| prior->YCS_E->process[recruit_E].ycs_values{1976} | -0.316 | -0.316 | -0.319 | -0.348 | -0.345 | -0.348 |
| prior->YCS_E->process[recruit_E].ycs_values{1977} | -0.227 | -0.227 | -0.238 | -0.274 | -0.272 | -0.274 |
| prior->YCS_E->process[recruit_E].ycs_values{1978} | 0.654 | 0.654 | 0.615 | 0.532 | 0.535 | 0.532 |
| prior->YCS_E->process[recruit_E].ycs_values{1979} | 0.084 | 0.084 | 0.062 | 0.007 | 0.012 | 0.007 |
| prior->YCS_E->process[recruit_E].ycs_values{1980} | -0.630 | -0.630 | -0.627 | -0.619 | -0.619 | -0.619 |
| prior->YCS_E->process[recruit_E].ycs_values{1981} | -0.619 | -0.619 | -0.623 | -0.631 | -0.631 | -0.631 |
| prior->YCS_E->process[recruit_E].ycs_values{1982} | -0.550 | -0.550 | -0.542 | -0.524 | -0.524 | -0.524 |
| prior->YCS_E->process[recruit_E].ycs_values{1983} | -0.627 | -0.627 | -0.630 | -0.635 | -0.635 | -0.635 |
| prior->YCS_E->process[recruit_E].ycs_values{1984} | -0.591 | -0.591 | -0.596 | -0.605 | -0.605 | -0.605 |
| prior->YCS_E->process[recruit_E].ycs_values{1985} | -0.641 | -0.641 | -0.642 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1986} | -0.408 | -0.408 | -0.400 | -0.383 | -0.385 | -0.383 |
| prior->YCS_E->process[recruit_E].ycs_values{1987} | 0.142 | 0.142 | 0.135 | 0.106 | 0.103 | 0.106 |
| prior->YCS_E->process[recruit_E].ycs_values{1988} | 0.026 | 0.026 | 0.019 | -0.024 | -0.025 | -0.024 |
| prior->YCS_E->process[recruit_E].ycs_values{1989} | -0.631 | -0.631 | -0.632 | -0.633 | -0.633 | -0.633 |
| prior->YCS_E->process[recruit_E].ycs_values{1990} | 0.159 | 0.159 | 0.158 | 0.144 | 0.145 | 0.144 |
| prior->YCS_E->process[recruit_E].ycs_values{1991} | -0.643 | -0.643 | -0.643 | -0.643 | -0.642 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1992} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1993} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{1994} | -0.530 | -0.530 | -0.525 | -0.536 | -0.538 | -0.536 |
| prior->YCS_E->process[recruit_E].ycs_values{1995} | -0.534 | -0.534 | -0.538 | -0.543 | -0.543 | -0.543 |
| prior->YCS_E->process[recruit_E].ycs_values{1996} | -0.574 | -0.574 | -0.577 | -0.584 | -0.583 | -0.584 |
| prior->YCS_E->process[recruit_E].ycs_values{1997} | -0.623 | -0.623 | -0.622 | -0.621 | -0.621 | -0.621 |
| prior->YCS_E->process[recruit_E].ycs_values{1998} | -0.512 | -0.512 | -0.513 | -0.509 | -0.508 | -0.509 |
| prior->YCS_E->process[recruit_E].ycs_values{1999} | 2.014 | 2.014 | 2.014 | 1.991 | 1.993 | 1.991 |
| prior->YCS_E->process[recruit_E].ycs_values{2000} | -0.616 | -0.616 | -0.614 | -0.613 | -0.613 | -0.613 |
| prior->YCS_E->process[recruit_E].ycs_values{2001} | -0.065 | -0.065 | -0.071 | -0.098 | -0.097 | -0.098 |
| prior->YCS_E->process[recruit_E].ycs_values{2002} | -0.543 | -0.543 | -0.545 | -0.542 | -0.539 | -0.542 |
| prior->YCS_E->process[recruit_E].ycs_values{2003} | -0.586 | -0.586 | -0.585 | -0.581 | -0.581 | -0.581 |
| prior->YCS_E->process[recruit_E].ycs_values{2004} | -0.568 | -0.568 | -0.568 | -0.563 | -0.564 | -0.563 |
| prior->YCS_E->process[recruit_E].ycs_values{2005} | -0.579 | -0.579 | -0.578 | -0.571 | -0.571 | -0.571 |
| prior->YCS_E->process[recruit_E].ycs_values{2006} | -0.483 | -0.483 | -0.482 | -0.474 | -0.474 | -0.474 |
| prior->YCS_E->process[recruit_E].ycs_values{2007} | -0.567 | -0.567 | -0.566 | -0.549 | -0.549 | -0.549 |
| prior->YCS_E->process[recruit_E].ycs_values{2008} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_E->process[recruit_E].ycs_values{2009} | -0.561 | -0.561 | -0.562 | -0.540 | -0.540 | -0.540 |
| prior->YCS_E->process[recruit_E].ycs_values{2010} | -0.031 | -0.031 | -0.046 | -0.100 | -0.100 | -0.100 |
| prior->YCS_E->process[recruit_E].ycs_values{2011} | -0.408 | -0.408 | -0.408 | -0.380 | -0.380 | -0.380 |
| prior->YCS_E->process[recruit_E].ycs_values{2012} | -0.019 | -0.019 | -0.023 | -0.072 | -0.074 | -0.072 |
| prior->YCS_E->process[recruit_E].ycs_values{2013} | -0.238 | -0.238 | -0.242 | -0.285 | -0.283 | -0.285 |
| prior->YCS_E->process[recruit_E].ycs_values{2014} | -0.317 | -0.317 | -0.314 | -0.258 | -0.258 | -0.258 |
| prior->YCS_E->process[recruit_E].ycs_values{2015} | -0.279 | -0.279 | -0.302 | -0.377 | -0.383 | -0.377 |
| prior->YCS_E->process[recruit_E].ycs_values{2016} | 0.363 | 0.363 | 0.373 | 0.554 | 0.556 | 0.554 |
| prior->YCS_W->process[recruit_W].ycs_values{1975} | -0.616 | -0.616 | -0.617 | -0.605 | -0.606 | -0.605 |
| prior->YCS_W->process[recruit_W].ycs_values{1976} | -0.195 | -0.195 | -0.184 | -0.156 | -0.153 | -0.156 |
| prior->YCS_W->process[recruit_W].ycs_values{1977} | -0.376 | -0.376 | -0.396 | -0.399 | -0.400 | -0.399 |
| prior->YCS_W->process[recruit_W].ycs_values{1978} | -0.396 | -0.396 | -0.417 | -0.420 | -0.422 | -0.420 |
| prior->YCS_W->process[recruit_W].ycs_values{1979} | -0.607 | -0.607 | -0.612 | -0.611 | -0.610 | -0.611 |
| prior->YCS_W->process[recruit_W].ycs_values{1980} | -0.567 | -0.567 | -0.573 | -0.567 | -0.568 | -0.567 |
| prior->YCS_W->process[recruit_W].ycs_values{1981} | -0.502 | -0.502 | -0.508 | -0.497 | -0.497 | -0.497 |
| prior->YCS_W->process[recruit_W].ycs_values{1982} | -0.606 | -0.606 | -0.607 | -0.600 | -0.600 | -0.600 |
| prior->YCS_W->process[recruit_W].ycs_values{1983} | -0.109 | -0.109 | -0.111 | -0.071 | -0.072 | -0.071 |
| prior->YCS_W->process[recruit_W].ycs_values{1984} | -0.163 | -0.163 | -0.163 | -0.115 | -0.116 | -0.115 |
| prior->YCS_W->process[recruit_W].ycs_values{1985} | -0.619 | -0.619 | -0.620 | -0.628 | -0.629 | -0.628 |
| prior->YCS_W->process[recruit_W].ycs_values{1986} | -0.098 | -0.098 | -0.098 | -0.127 | -0.129 | -0.127 |
| prior->YCS_W->process[recruit_W].ycs_values{1987} | 0.788 | 0.788 | 0.782 | 0.896 | 0.894 | 0.896 |
| prior->YCS_W->process[recruit_W].ycs_values{1988} | -0.252 | -0.252 | -0.255 | -0.203 | -0.200 | -0.203 |
| prior->YCS_W->process[recruit_W].ycs_values{1989} | 1.207 | 1.207 | 1.211 | 1.207 | 1.209 | 1.207 |
| prior->YCS_W->process[recruit_W].ycs_values{1990} | 1.197 | 1.197 | 1.204 | 1.240 | 1.206 | 1.240 |
| prior->YCS_W->process[recruit_W].ycs_values{1991} | -0.081 | -0.081 | -0.080 | -0.142 | -0.139 | -0.142 |
| prior->YCS_W->process[recruit_W].ycs_values{1992} | 0.480 | 0.480 | 0.480 | 0.456 | 0.455 | 0.456 |
| prior->YCS_W->process[recruit_W].ycs_values{1993} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_W->process[recruit_W].ycs_values{1994} | 0.014 | 0.014 | 0.020 | 0.071 | 0.070 | 0.071 |
| prior->YCS_W->process[recruit_W].ycs_values{1995} | -0.410 | -0.410 | -0.413 | -0.416 | -0.414 | -0.416 |
| prior->YCS_W->process[recruit_W].ycs_values{1996} | -0.301 | -0.301 | -0.306 | -0.249 | -0.249 | -0.249 |
| prior->YCS_W->process[recruit_W].ycs_values{1997} | -0.466 | -0.466 | -0.471 | -0.458 | -0.462 | -0.458 |
| prior->YCS_W->process[recruit_W].ycs_values{1998} | -0.322 | -0.322 | -0.334 | -0.371 | -0.372 | -0.371 |
| prior->YCS_W->process[recruit_W].ycs_values{1999} | 2.014 | 2.014 | 2.014 | 1.995 | 1.996 | 1.995 |
| prior->YCS_W->process[recruit_W].ycs_values{2000} | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 | -0.643 |
| prior->YCS_W->process[recruit_W].ycs_values{2001} | 0.856 | 0.856 | 0.846 | 0.820 | 0.819 | 0.820 |
| prior->YCS_W->process[recruit_W].ycs_values{2002} | -0.222 | -0.222 | -0.222 | -0.217 | -0.214 | -0.217 |
| prior->YCS_W->process[recruit_W].ycs_values{2003} | -0.612 | -0.612 | -0.612 | -0.609 | -0.608 | -0.609 |
| prior->YCS_W->process[recruit_W].ycs_values{2004} | -0.570 | -0.570 | -0.571 | -0.567 | -0.566 | -0.567 |
| prior->YCS_W->process[recruit_W].ycs_values{2005} | -0.574 | -0.574 | -0.576 | -0.572 | -0.572 | -0.572 |
| prior->YCS_W->process[recruit_W].ycs_values{2006} | -0.280 | -0.280 | -0.279 | -0.289 | -0.288 | -0.289 |
| prior->YCS_W->process[recruit_W].ycs_values{2007} | -0.438 | -0.438 | -0.436 | -0.463 | -0.463 | -0.463 |
| prior->YCS_W->process[recruit_W].ycs_values{2008} | -0.464 | -0.464 | -0.463 | -0.476 | -0.476 | -0.476 |
| prior->YCS_W->process[recruit_W].ycs_values{2009} | -0.514 | -0.514 | -0.508 | -0.532 | -0.531 | -0.532 |
| prior->YCS_W->process[recruit_W].ycs_values{2010} | 0.071 | 0.071 | 0.078 | 0.124 | 0.121 | 0.124 |
| prior->YCS_W->process[recruit_W].ycs_values{2011} | 0.031 | 0.031 | 0.043 | -0.009 | -0.009 | -0.009 |
| prior->YCS_W->process[recruit_W].ycs_values{2012} | -0.050 | -0.050 | -0.059 | -0.017 | -0.015 | -0.017 |
| prior->YCS_W->process[recruit_W].ycs_values{2013} | -0.489 | -0.489 | -0.490 | -0.415 | -0.416 | -0.415 |
| prior->YCS_W->process[recruit_W].ycs_values{2014} | 1.730 | 1.730 | 1.742 | 1.601 | 1.598 | 1.601 |
| prior->YCS_W->process[recruit_W].ycs_values{2015} | 1.681 | 1.681 | 1.687 | 1.660 | 1.662 | 1.660 |
| prior->YCS_W->process[recruit_W].ycs_values{2016} | 0.363 | 0.364 | 0.373 | 0.554 | 0.556 | 0.554 |
| prior->sel_Whome->selectivity[sel_Whome].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Whome->selectivity[sel_Whome].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Espmg_male->selectivity[sel_Espmg].v{8} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{1} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{2} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{3} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{4} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{5} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{6} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{7} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->sel_Wspmg_male->selectivity[sel_Wspmg].v{8} | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_mu->selectivity[Enspsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_s_l->selectivity[Enspsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Enspsl_s_r->selectivity[Enspsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_mu->selectivity[Wnspsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_s_l->selectivity[Wnspsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Wnspsl_s_r->selectivity[Wnspsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_mu->selectivity[Espsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_s_l->selectivity[Espsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->Espsl_s_r->selectivity[Espsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_mu->selectivity[CRsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_s_l->selectivity[CRsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->CRsl_s_r->selectivity[CRsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_mu->selectivity[SAsl].mu | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_s_l->selectivity[SAsl].sigma_l | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| prior->SAsl_s_r->selectivity[SAsl].sigma_r | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| additional_prior->YCS.eq.16 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| additional_prior->sp.migr | 0.009 | 0.009 | 0.013 | 0.021 | 0.023 | 0.021 |
| jacobian->log_sum_b0 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 | 0.000 |
| total_score | 1946.810 | 1946.810 | 1946.540 | 1954.680 | 1954.660 | 1954.680 |
## [1] "CASAL base model convergence information"
## [1] "fmm: have converged: t = 8.24015e-007 f = 1946.54"
## [2] "Successful convergence in optimise"
## [3] "Minimiser achieved convergence after 599 quasi-Newton iterations using 669 objective function evaluations"
## [1] ""
## [1] "CASAL sensitivity 1 model convergence information"
## [1] "fmm: step size too small. Indicates successful convergence (though this is not the textbook ideal convergence situation)"
## [2] "Successful convergence in optimise"
## [3] "Minimiser achieved convergence after 665 quasi-Newton iterations using 765 objective function evaluations"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on model convergence information"
## [1] "fmm: have converged: t = 8.77772e-07 f = 1946.81"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_off model convergence information"
## [1] "fmm: have converged: t = 8.73289e-07 f = 1946.81"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on_low_tol model convergence information"
## [1] "fmm: step size too small. Indicates successful convergence (though this is not the textbook ideal convergence situation)"
## [2] "Successful convergence in optimise"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] ""
## [1] "Casal2 adolc_casal_flags_off model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on_low_tol model convergence information"
## [1] "[IMPORTANT] FMM: Max newton steps (5)"
## [2] "FMM: Max newton steps (5)"
## [1] "CASAL model warnings"
## parameter estimate lower.bound upper.bound
## 1 recruitment[E].YCS[25] 0.06 0.06 8.6
## 2 recruitment[W].YCS[25] 0.06 0.06 8.6
## 3 selectivity[CRsl].all[1] 1 1 17
## 4 selectivity[CRsl].all[2] 1 1 50
## [1] ""
## [1] "CASAL sensitivity 1 model warnings"
## parameter estimate lower.bound upper.bound
## 1 recruitment[E].YCS[25] 0.06 0.06 8.6
## 2 recruitment[W].YCS[25] 0.06 0.06 8.6
## 3 selectivity[CRsl].all[1] 1 1 17
## 4 selectivity[CRsl].all[2] 1 1 50
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [8] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [9] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [10] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [11] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [12] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [13] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [14] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [15] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [16] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [17] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [18] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [19] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_off model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [8] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [9] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [10] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [11] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [12] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [13] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [14] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [15] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [16] "estimated parameter 'selectivity[Enspsl].sigma_r' was within 0.001 of upper bound 50"
## [17] "estimated parameter 'selectivity[Wnspsl].sigma_r' was within 0.001 of upper bound 50"
## [18] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [19] "estimated parameter 'selectivity[SAsl].sigma_r' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 betadiff_casal_flags_on_low_tol model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[CRsl].mu' was within 0.001 of lower bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_off model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [1] ""
## [1] "Casal2 adolc_casal_flags_on_low_tol model warnings"
## [1] "Estimates were removed because of matching lower and upper bounds. Originally had 134 estimates, now have 133"
## [2] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [3] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [4] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [5] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [6] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
## [7] "estimated parameter 'process[recruit_E].b0' was within 0.001 of upper bound 16.2"
## [8] "estimated parameter 'process[recruit_W].b0' was within 0.001 of upper bound 0.59"
## [9] "estimated parameter 'process[recruit_E].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [10] "estimated parameter 'process[recruit_W].ycs_values{1999}' was within 0.001 of lower bound 0.06"
## [11] "estimated parameter 'selectivity[sel_Whome].v{7}' was within 0.001 of upper bound 1"
Time series comparisons with CASAL base model results
## [1] "Catch time series base model comparison for run betadiff_casal_flags_on"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run betadiff_casal_flags_off"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run betadiff_casal_flags_on_low_tol"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_on"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_off"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
## [1] "Catch time series base model comparison for run adolc_casal_flags_on_low_tol"
## [1] "Actual catches for Ensp1 match: yes"
## [1] "Actual catches for Wnsp1 match: yes"
## [1] "Actual catches for Ensp2 match: yes"
## [1] "Actual catches for Wnsp2 match: yes"
## [1] "Actual catches for Esp match: yes"
## [1] "Actual catches for Wsp match: yes"
## [1] ""
Derived quantities
SB0, SBcurrent, MSY, F_MSY, others…
Comparison plots
## [1] "CASAL base parameter correlation range (excluding 1.0): -0.9914 0.9969"
## [1] "CASAL sensitivity 1 parameter correlation range (excluding 1.0): -0.9324 0.9968"
## [1] "Casal2 betadiff_casal_flags_on parameter correlation range (excluding 1.0): -0.884551 0.996712"
## Warning in min(x): no non-missing arguments to min; returning Inf
## Warning in max(x): no non-missing arguments to max; returning -Inf
## [1] "Casal2 betadiff_casal_flags_off parameter correlation range (excluding 1.0): Inf -Inf"
## [1] "Casal2 betadiff_casal_flags_on_low_tol parameter correlation range (excluding 1.0): -0.939271 0.996743"
## [1] "Casal2 adolc_casal_flags_on parameter correlation range (excluding 1.0): -0.999997 0.999999"
## [1] "Casal2 adolc_casal_flags_off parameter correlation range (excluding 1.0): -0.999997 0.999998"
## [1] "Casal2 adolc_casal_flags_on_low_tol parameter correlation range (excluding 1.0): -0.999997 0.999999"